RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RSPO2Q6UXX9 243 aaPredicted RBP16.59■□□□□ 0.25
TRIM13-201ENST00000356017 RRAGAQ7L523 313 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 ADGRD2Q7Z7M1 963 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 OR10T2Q8NGX3 314 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 ARID3AQ99856 593 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 RTP3Q9BQQ7 232 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 ZCWPW1Q9H0M4 648 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 SDCBP2Q9H190 292 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 CISHQ9NSE2 258 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 MAFFQ9ULX9 164 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 A0A1W2PQC6 194 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 PER2O15055 1255 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 TEX33O43247 280 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 CLASP2O75122 1294 aaKnown RBP16.59■□□□□ 0.25
TRIM13-201ENST00000356017 CILPO75339 1184 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 GLUD1P00367 558 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 PDGFRBP09619 1106 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 CD58P19256 250 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 ARPP19P56211 112 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 ROR1Q01973 937 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
TRIM13-201ENST00000356017 KLHDC7AQ5VTJ3 777 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 ELMSAN1Q6PJG2 1045 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 OSTM1Q86WC4 334 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 GLYCTKQ8IVS8 523 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 ARHGEF19Q8IW93 802 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 SYT15Q9BQS2 421 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 LSM14BQ9BX40 385 aaKnown RBP16.59■□□□□ 0.25
TRIM13-201ENST00000356017 NT5C1AQ9BXI3 368 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 IFNKQ9P0W0 207 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 SIK3Q9Y2K2 1263 aa16.59■□□□□ 0.25
TRIM13-201ENST00000356017 VWA8A3KMH1 1905 aa16.58■□□□□ 0.25
TRIM13-201ENST00000356017 ABLIM3O94929 683 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 SRGAP2BP0DMP2 458 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 CLCN4P51793 760 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 NDST1P52848 882 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 NFE2Q16621 373 aaPredicted RBP16.58■□□□□ 0.24
TRIM13-201ENST00000356017 UVSSAQ2YD98 709 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 PALB2Q86YC2 1186 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 CRYBG2Q8N1P7 616 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 NEK11Q8NG66 645 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 C2orf15Q8WU43 125 aaKnown RBP16.58■□□□□ 0.24
TRIM13-201ENST00000356017 SIX2Q9NPC8 291 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 DNAJC12Q9UKB3 198 aa16.58■□□□□ 0.24
TRIM13-201ENST00000356017 WDR27A2RRH5 827 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 ADAM12O43184 909 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 TGM5O43548 720 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 ATF2P15336 505 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 UCHL3P15374 230 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 PTPN1P18031 435 aaKnown RBP16.57■□□□□ 0.24
TRIM13-201ENST00000356017 ACAT1P24752 427 aaKnown RBP16.57■□□□□ 0.24
TRIM13-201ENST00000356017 PLCB2Q00722 1185 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 HYAL1Q12794 435 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 SLC39A12Q504Y0 691 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 LILRA6Q6PI73 481 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 SARM1Q6SZW1 724 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 EFHBQ8N7U6 833 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 B3GALNT2Q8NCR0 500 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 HDAC7Q8WUI4 952 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 PLEKHA4Q9H4M7 779 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 FAM207AQ9NSI2 230 aaPredicted RBP16.57■□□□□ 0.24
TRIM13-201ENST00000356017 AFF4Q9UHB7 1163 aaKnown RBP16.57■□□□□ 0.24
TRIM13-201ENST00000356017 HCFC2Q9Y5Z7 792 aa16.57■□□□□ 0.24
TRIM13-201ENST00000356017 ELF1P32519 619 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 DPY19L2P1Q6NXN4 242 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 FAM171BQ6P995 826 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 C4orf50Q6ZRC1 276 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 RTL10Q7L3V2 364 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 MICALL1Q8N3F8 863 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 MYCBPAPQ8TBZ2 947 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 SLC22A17Q8WUG5 538 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 TMEM176AQ96HP8 235 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 KREMEN1Q96MU8 473 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 TMEM209Q96SK2 561 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 IGFLR1Q9H665 355 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 HSFX1Q9UBD0 423 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 GTF3C4Q9UKN8 822 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 PCDHB4Q9Y5E5 795 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 MYO9BQ13459 2157 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 SZT2Q5T011 3432 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 TRANK1O15050 2925 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 OR4Q2P0C623 313 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 ACO1P21399 889 aaKnown RBP16.56■□□□□ 0.24
TRIM13-201ENST00000356017 PSMC1P62191 440 aaKnown RBP16.56■□□□□ 0.24
TRIM13-201ENST00000356017 APBA1Q02410 837 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 GJB7Q6PEY0 223 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 TMEM270Q6UE05 265 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 TMEM184AQ6ZMB5 413 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 RNF19BQ6ZMZ0 732 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 ACOT1Q86TX2 421 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 LRRTM3Q86VH5 581 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 UBR7Q8N806 425 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 SPPL2BQ8TCT7 592 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 WHAMMQ8TF30 809 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 CASP10Q92851 521 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 KAT5Q92993 513 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 FUBP3Q96I24 572 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRIM13-201ENST00000356017 PKMYT1Q99640 499 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 STK33Q9BYT3 514 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 XPO4Q9C0E2 1151 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms