RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 OXCT2Q9BYC2 517 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-201ENST00000355572 LRRC27Q9C0I9 530 aa18.01■□□□□ 0.47
PDLIM7-201ENST00000355572 ASAH2Q9NR71 780 aa18.01■□□□□ 0.47
PDLIM7-201ENST00000355572 ITGA11Q9UKX5 1188 aa18.01■□□□□ 0.47
PDLIM7-201ENST00000355572 MYO15AQ9UKN7 3530 aa18.01■□□□□ 0.47
PDLIM7-201ENST00000355572 HELZP42694 1942 aaKnown RBP18■□□□□ 0.47
PDLIM7-201ENST00000355572 ZNF233A6NK53 670 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 MICAL2O94851 1124 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 TMEM191BP0C7N4 346 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 SLFN14P0C7P3 912 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 HAPLN1P10915 354 aaPredicted RBP18■□□□□ 0.47
PDLIM7-201ENST00000355572 PDIA4P13667 645 aaKnown RBP18■□□□□ 0.47
PDLIM7-201ENST00000355572 CASP4P49662 377 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 NDUFA8P51970 172 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 MLF2Q15773 248 aaPredicted RBP18■□□□□ 0.47
PDLIM7-201ENST00000355572 SLC44A4Q53GD3 710 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 CYP4A22Q5TCH4 519 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 PHLDB3Q6NSJ2 640 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 LIMS2Q7Z4I7 341 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 LRRC52Q8N7C0 313 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 PJA1Q8NG27 643 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 ATOH1Q92858 354 aaPredicted RBP18■□□□□ 0.47
PDLIM7-201ENST00000355572 PSMG2Q969U7 264 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 ELSPBP1Q96BH3 223 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 SPATA32Q96LK8 384 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 HEBP1Q9NRV9 189 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 GDAP2Q9NXN4 497 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 ABI2Q9NYB9 513 aaPredicted RBP18■□□□□ 0.47
PDLIM7-201ENST00000355572 DSEQ9UL01 958 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 SNX9Q9Y5X1 595 aa18■□□□□ 0.47
PDLIM7-201ENST00000355572 UBE4BO95155 1302 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 DMDP11532 3685 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 FAM237AA0A1B0GTK4 181 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 PVALEFA0A1B0GWK0 134 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 STK25O00506 426 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 ZNF197O14709 1029 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 GABRDO14764 452 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 HMGA1P17096 107 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 PAX3P23760 479 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 CMA1P23946 247 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 LMO2P25791 158 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 EPHB3P54753 998 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 CYP24A1Q07973 514 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 PLD1Q13393 1074 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 SNRNP35Q16560 246 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 MGAT5BQ3V5L5 792 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 TRAPPC11Q7Z392 1133 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 ELMOD1Q8N336 334 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 SMARCD2Q92925 531 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 PRRX2Q99811 253 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 PI4K2AQ9BTU6 479 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 DDX43Q9NXZ2 648 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 GTF3C4Q9UKN8 822 aa17.99■□□□□ 0.47
PDLIM7-201ENST00000355572 USP34Q70CQ2 3546 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 MYBPHLA2RUH7 354 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 ARNTLO00327 626 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 PRAMEF12O95522 483 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 TARSP26639 723 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 GABRR2P28476 465 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 ALDH1A3P47895 512 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 RBP5P82980 135 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 FZD5Q13467 585 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 PSMD6Q15008 389 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 ANGPT1Q15389 498 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 INTS6LQ5JSJ4 861 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 STXBP4Q6ZWJ1 553 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 METTL23Q86XA0 190 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 ADGRF2Q8IZF7 708 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 MAML2Q8IZL2 1156 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 THEM5Q8N1Q8 247 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 RIN3Q8TB24 985 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 CACTINQ8WUQ7 758 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 CCDC127Q96BQ5 260 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 CGRRF1Q99675 332 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 SMG9Q9H0W8 520 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 KCTD10Q9H3F6 313 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 TRPV4Q9HBA0 871 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 ZFP14Q9HCL3 533 aa17.98■□□□□ 0.47
PDLIM7-201ENST00000355572 HEPACAM2A8MVW5 462 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 KIAA0391O15091 583 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 TADA3O75528 432 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 DLATP10515 647 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 CYP2F1P24903 491 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 PNPLA4P41247 253 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 NUBP1P53384 320 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 PSMC1P62191 440 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 KRT85P78386 507 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 KNOP1Q1ED39 458 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 WDR44Q5JSH3 913 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 TPRG1Q6ZUI0 275 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 WDR49Q8IV35 697 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 CEP57L1Q8IYX8 460 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 ZNF687Q8N1G0 1237 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 XXYLT1Q8NBI6 393 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 HPDLQ96IR7 371 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 ANKRD36BP1Q96IX9 119 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 MRPL45Q9BRJ2 306 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 LTB4R2Q9NPC1 389 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 CRTAC1Q9NQ79 661 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 HSFX1Q9UBD0 423 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms