RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CDHR2Q9BYE9 1310 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 ZFYVE16Q7Z3T8 1539 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 MAGEA13PA6NCF6 341 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 POLRMTO00411 1230 aaKnown RBP15.5■□□□□ 0.07
LMX1B-201ENST00000355497 SOAT2O75908 522 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 CHRM3P20309 590 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 ARMC6Q6NXE6 501 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 TRIM65Q6PJ69 517 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 ZNF786Q8N393 782 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 SMARCAD1Q9H4L7 1026 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.5■□□□□ 0.07
LMX1B-201ENST00000355497 CDK12Q9NYV4 1490 aaPredicted RBP15.5■□□□□ 0.07
LMX1B-201ENST00000355497 SNTNA6NMZ2 147 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 H2AFYO75367 372 aaKnown RBP15.5■□□□□ 0.07
LMX1B-201ENST00000355497 CD4P01730 458 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 NUDT2P50583 147 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 DPYDQ12882 1025 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 XKR3Q5GH77 459 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 ADSSL1Q8N142 457 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 TMEM143Q96AN5 459 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 AP4S1Q9Y587 144 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 VWA5AO00534 786 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 GRK2P25098 689 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 MLH1P40692 756 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 KCNJ6P48051 423 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 SGMS1Q86VZ5 419 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 ZNF513Q8N8E2 541 aaPredicted RBP15.5■□□□□ 0.07
LMX1B-201ENST00000355497 DDI1Q8WTU0 396 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 HPS3Q969F9 1004 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 REEP2Q9BRK0 252 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 GPR63Q9BZJ6 419 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 SLC39A10Q9ULF5 831 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 NCAPD2Q15021 1401 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 GSG1L2A8MUP6 293 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 PDGFRBP09619 1106 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 PTPN7P35236 360 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 RGS2P41220 211 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 ST13P50502 369 aaKnown RBP15.5■□□□□ 0.07
LMX1B-201ENST00000355497 EPHA10Q5JZY3 1008 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 UGT3A1Q6NUS8 523 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 C11orf96Q7Z7L8 435 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 C19orf60Q96EN9 201 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 ISCUQ9H1K1 167 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 KCND2Q9NZV8 630 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 SPASTQ9UBP0 616 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
LMX1B-201ENST00000355497 COMTP21964 271 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 ALDH6A1Q02252 535 aaKnown RBP15.49■□□□□ 0.07
LMX1B-201ENST00000355497 PWP1Q13610 501 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 SV2CQ496J9 727 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 SLC44A4Q53GD3 710 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 NAPEPLDQ6IQ20 393 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 ZIM3Q96PE6 472 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 FAM118BQ9BPY3 351 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 LOC100653049A0A140TA62 436 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 ZBTB39O15060 712 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 KRT34O76011 436 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 CPA2P48052 419 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 CNTN1Q12860 1018 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 CACHD1Q5VU97 1274 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 E4F1Q66K89 784 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-201ENST00000355497 SEPT5Q99719 369 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-201ENST00000355497 KLHL31Q9H511 634 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 HERC5Q9UII4 1024 aaKnown RBP15.49■□□□□ 0.07
LMX1B-201ENST00000355497 TMEM253P0C7T8 217 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 ATP6V1B1P15313 513 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 PRIM2P49643 509 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 NCKAP1LP55160 1127 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 SH3BP1Q9Y3L3 701 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 ERVK-7P63135 1459 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 ALOX15P16050 662 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-201ENST00000355497 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.49■□□□□ 0.07
LMX1B-201ENST00000355497 STX5Q13190 355 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 GOLGA7BQ2TAP0 167 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 FUT11Q495W5 492 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 LINC00523Q86TU6 105 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 TLK2Q86UE8 772 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 APLFQ8IW19 511 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-201ENST00000355497 NEDD1Q8NHV4 660 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 RIN3Q8TB24 985 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 SH3GL1Q99961 368 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 GINS4Q9BRT9 223 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 CCSER1Q9C0I3 900 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 WWOXQ9NZC7 414 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 MTSS1O43312 755 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 GRAP2O75791 330 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 EPB42P16452 691 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 ETFBP38117 255 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 CCZ1BP86790 482 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 CCZ1P86791 482 aaPredicted RBP15.49■□□□□ 0.07
LMX1B-201ENST00000355497 PGBD3Q8N328 593 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 FHOD1Q9Y613 1164 aa15.49■□□□□ 0.07
LMX1B-201ENST00000355497 NBPF26B4DH59 902 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 NUP107P57740 925 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 PTGISQ16647 500 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 FAM83EQ2M2I3 478 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 MROH9Q5TGP6 573 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 BARGINQ6ZT62 677 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 SYNE4Q8N205 404 aa15.48■□□□□ 0.07
LMX1B-201ENST00000355497 NBPF15Q8N660 670 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms