RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 HSPA1AP0DMV8 641 aaKnown RBP18.8■□□□□ 0.6
COL18A1-202ENST00000355480 HSPA1BP0DMV9 641 aaKnown RBP18.8■□□□□ 0.6
COL18A1-202ENST00000355480 SEZ6Q53EL9 994 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 RASGRP2Q7LDG7 609 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 WDR48Q8TAF3 677 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 GPR182O15218 404 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 MSH4O15457 936 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 YY1P25490 414 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 SLC11A2P49281 568 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 TMEM132BQ14DG7 1078 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 KLHDC7AQ5VTJ3 777 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 JAMLQ86YT9 394 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 FAM71DQ8N9W8 422 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 FAM167BQ9BTA0 163 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.8■□□□□ 0.63e-7■■■□□ 17.1
COL18A1-202ENST00000355480 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-202ENST00000355480 SPAG6O75602 509 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 CYP11B2P19099 503 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 KLK7P49862 253 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 ZNF177Q13360 481 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-202ENST00000355480 SLC15A2Q16348 729 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 ZNF555Q8NEP9 628 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.8■□□□□ 0.63e-7■■■■■ 67.1
COL18A1-202ENST00000355480 OLFML3Q9NRN5 406 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 CDYLQ9Y232 598 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 CLASP2O75122 1294 aaKnown RBP18.8■□□□□ 0.6
COL18A1-202ENST00000355480 BRD8Q9H0E9 1235 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 GOLPH3Q9H4A6 298 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 WDCPQ9H6R7 721 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 DDIT4Q9NX09 232 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.8■□□□□ 0.64e-6■■■■□ 26.5
COL18A1-202ENST00000355480 PKD2L2Q9NZM6 624 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 ALG6Q9Y672 507 aa18.8■□□□□ 0.6
COL18A1-202ENST00000355480 CSE1LP55060 971 aaKnown RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 GJB7Q6PEY0 223 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 M0QYT0 321 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 SRP72O76094 671 aaKnown RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 B3GAT3O94766 335 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 SOX11P35716 441 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 MAGEA4P43358 317 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 PLA2G4AP47712 749 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 LRRC23Q53EV4 343 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 PRUNE1Q86TP1 453 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 ZNF669Q96BR6 464 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 ZNF556Q9HAH1 456 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 C17orf75Q9HAS0 396 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 GIMAP4Q9NUV9 329 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 IQGAP3Q86VI3 1631 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 PNPLA6Q8IY17 1366 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 AKAP10O43572 662 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 KDM1AO60341 852 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 MAN1A2O60476 641 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 SNRPAP09012 282 aaKnown RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 MZF1P28698 734 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 C11orf96Q7Z7L8 435 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 CATSPER1Q8NEC5 780 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 C6orf203Q9P0P8 240 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 SLC2A3P11169 496 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 CAP2P40123 477 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 ACTN3Q08043 901 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 PLEKHH3Q7Z736 793 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 OOSP2Q86WS3 158 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 RPRD1AQ96P16 312 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 CHORDC1Q9UHD1 332 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 EPB42P16452 691 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 CDH2P19022 906 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 SOAT1P35610 550 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 CUL2Q13617 745 aa18.79■□□□□ 0.6
COL18A1-202ENST00000355480 TFB1MQ8WVM0 346 aaKnown RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 RBM12Q9NTZ6 932 aaKnown RBP18.79■□□□□ 0.6
COL18A1-202ENST00000355480 CROCC2H7BZ55 1655 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 PRR23AA6NEV1 266 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 H7C4K7 107 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 STX7O15400 261 aaKnown RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 AP1G2O75843 785 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 ACO1P21399 889 aaKnown RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 TTC39BQ5VTQ0 682 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 TRIM48Q8IWZ4 208 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 PARP9Q8IXQ6 854 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 SLC16A10Q8TF71 515 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 ACSF2Q96CM8 615 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 KLF6Q99612 283 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 PPCSQ9HAB8 311 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 SMARCAL1Q9NZC9 954 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 FAM47DPA6NHR8 397 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 CYP2C8P10632 490 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 ITGA8P53708 1063 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 HPCAP84074 193 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 CENPCQ03188 943 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 CYTH1Q15438 398 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 PCYOX1LQ8NBM8 494 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 OSBPL1AQ9BXW6 950 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 AGPAT3Q9NRZ7 376 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 EIF4E1BA6NMX2 242 aaKnown RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 PMPCBO75439 489 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 MDH1P40925 334 aaKnown RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 PAN2Q504Q3 1202 aaKnown RBP18.78■□□□□ 0.6
COL18A1-202ENST00000355480 SLC39A10Q9ULF5 831 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms