RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 LRRC31Q6UY01 552 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 PCGF5Q86SE9 256 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 CROCCP2Q86T23 111 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 SMC6Q96SB8 1091 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ADAM2Q99965 735 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 TRPC7Q9HCX4 862 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 PSD3Q9NYI0 1048 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 AIPL1Q9NZN9 384 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 A0A0G2JLL6 359 aaPredicted RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ARIH2O95376 493 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 CDK17Q00537 523 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 DEUP1Q05D60 604 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 PRPSAP1Q14558 356 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 SLMAPQ14BN4 828 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 HYIQ5T013 277 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 PRRT2Q7Z6L0 340 aaPredicted RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 USP38Q8NB14 1042 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 CDKL2Q92772 493 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 N4BP2L2Q92802 583 aaPredicted RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 RSRC1Q96IZ7 334 aaKnown RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 NUDT5Q9UKK9 219 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 GTPBP10A4D1E9 387 aaKnown RBP12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 SLC15A5A6NIM6 579 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 CRCPO75575 148 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 FAM200BP0CF97 657 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 NR1D1P20393 614 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 PCSK1P29120 753 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 EPHB1P54762 984 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 CORO7P57737 925 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 TTC39CQ8N584 583 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 PPM1NQ8N819 430 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 SPATA18Q8TC71 538 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 KLC2Q9H0B6 622 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 CXorf56Q9H5V9 222 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
PCDHB11-201ENST00000354757 ARF4P18085 180 aaPredicted RBP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 MAP3K7CLP57077 242 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 TSTA3Q13630 321 aaPredicted RBP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 PSMD6Q15008 389 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 FYB2Q5VWT5 728 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 TDRD10Q5VZ19 366 aaKnown RBP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 SCUBE3Q8IX30 993 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 ADGRF2Q8IZF7 708 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 ADAM32Q8TC27 787 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 HSD3B7Q9H2F3 369 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 HMX1Q9NP08 348 aaPredicted RBP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 XPNPEP1Q9NQW7 623 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 RAB6BQ9NRW1 208 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 DDIT4Q9NX09 232 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 NKRFO15226 690 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 ATP9BO43861 1147 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 MLH1P40692 756 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 CCL23P55773 120 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 ROR1Q01973 937 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 LRRC14Q15048 493 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 P3H1Q32P28 736 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 GLE1Q53GS7 698 aaKnown RBP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 SENP6Q9GZR1 1112 aaPredicted RBP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 TSPAN16Q9UKR8 245 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 L1RE1Q9UN81 338 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 PLCH1Q4KWH8 1693 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 NFASCO94856 1347 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 SDK1Q7Z5N4 2213 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 GBP1P32455 592 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 SCNN1GP51170 649 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 TPI1P60174 286 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 MAGOHP61326 146 aaKnown RBP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 NOGQ13253 232 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 JAMLQ86YT9 394 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 TTC13Q8NBP0 860 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 EPS8L1Q8TE68 723 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 BAP1Q92560 729 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 EDEM1Q92611 657 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 SEMA4DQ92854 862 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 TMEM176AQ96HP8 235 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 TACO1Q9BSH4 297 aaKnown RBP12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 FIS1Q9Y3D6 152 aa12.98□□□□□ -0.33
PCDHB11-201ENST00000354757 GLI3P10071 1580 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 M0QYT0 321 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 PRRG1O14668 218 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 TREHO43280 583 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 MT-ND3P03897 115 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 PMS2P54278 862 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 MYBPC2Q14324 1141 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 MDH1BQ5I0G3 518 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 SMC1BQ8NDV3 1235 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 SHCBP1Q8NEM2 672 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 CFAP57Q96MR6 1250 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 CCDC68Q9H2F9 335 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 NXF3Q9H4D5 531 aaKnown RBP12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
PCDHB11-201ENST00000354757 WDR35Q9P2L0 1181 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms