RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 WDR81Q562E7 1941 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 ADGRA2Q96PE1 1338 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 A0A0G2JLL6 359 aaPredicted RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 DDX3XO00571 662 aaKnown RBP eCLIP11.4□□□□□ -0.586e-62■■■□□ 15.1
SND1-201ENST00000354725 HLA-DOAP06340 250 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 SLC9A1P19634 815 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 RPA1P27694 616 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 CIITAP33076 1130 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 KNOP1Q1ED39 458 aaKnown RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 ZNF568Q3ZCX4 644 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 TDRD12Q587J7 1177 aaKnown RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 PRRT2Q7Z6L0 340 aaPredicted RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 ANKS4BQ8N8V4 417 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 ATP6V1E2Q96A05 226 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 PAWRQ96IZ0 340 aaKnown RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 TUBGCP5Q96RT8 1024 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 OLFML3Q9NRN5 406 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 NOC2LQ9Y3T9 749 aaKnown RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 FAM32AQ9Y421 112 aaKnown RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 FADS3Q9Y5Q0 445 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 A0A1W2PRG0 241 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 RTCAO00442 366 aaKnown RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 AKAP3O75969 853 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 CYP1A1P04798 512 aaPredicted RBP11.4□□□□□ -0.58
SND1-201ENST00000354725 ACTN1P12814 892 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 TM4SF4P48230 202 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 PHLDB3Q6NSJ2 640 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 NEK5Q6P3R8 708 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 CATSPER3Q86XQ3 398 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 IFT81Q8WYA0 676 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 CASP10Q92851 521 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 FIZ1Q96SL8 496 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 PTPN18Q99952 460 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 CFHR5Q9BXR6 569 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 KIAA1024Q9UPX6 916 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 TSC22D4Q9Y3Q8 395 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 PCDHA3Q9Y5H8 950 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 LCTP09848 1927 aa11.4□□□□□ -0.58
SND1-201ENST00000354725 MAGEA13PA6NCF6 341 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 PGRMC1O00264 195 aaKnown RBP11.4□□□□□ -0.59
SND1-201ENST00000354725 KLHL41O60662 606 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 AFPP02771 609 aaKnown RBP11.4□□□□□ -0.59
SND1-201ENST00000354725 VEGFBP49765 207 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 MSLNQ13421 630 aaPredicted RBP11.4□□□□□ -0.59
SND1-201ENST00000354725 RPS6KA1Q15418 735 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 SLFN12Q8IYM2 578 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 LNX1Q8TBB1 728 aaPredicted RBP11.4□□□□□ -0.59
SND1-201ENST00000354725 SH3TC2Q8TF17 1288 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 ZNF75CPQ92670 426 aaPredicted RBP11.4□□□□□ -0.59
SND1-201ENST00000354725 TBCCD1Q9NVR7 557 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 RASAL2Q9UJF2 1139 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 STK38LQ9Y2H1 464 aa11.4□□□□□ -0.59
SND1-201ENST00000354725 SYNDIG1LA6NDD5 238 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 CCDC85CA6NKD9 419 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 MAGEB3O15480 346 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 DDX5P17844 614 aaKnown RBP11.39□□□□□ -0.59
SND1-201ENST00000354725 CALB2P22676 271 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 AP3B2Q13367 1082 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 SMAD4Q13485 552 aaKnown RBP11.39□□□□□ -0.59
SND1-201ENST00000354725 RAPGEF1Q13905 1077 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 MAJINQ3KP22 176 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 FAM209AQ5JX71 171 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 DAB2IPQ5VWQ8 1189 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 GPBP1Q86WP2 473 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 SCAIQ8N9R8 606 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 CENPFP49454 3210 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 NUDT17P0C025 328 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 HUNKP57058 714 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 MUM1Q2TAK8 710 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 TTBK2Q6IQ55 1244 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 LRRC47Q8N1G4 583 aaKnown RBP11.39□□□□□ -0.59
SND1-201ENST00000354725 C12orf42Q96LP6 360 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 STRA6Q9BX79 667 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 KANSL2Q9H9L4 492 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 LRRC4CQ9HCJ2 640 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 TYW1Q9NV66 732 aaKnown RBP11.39□□□□□ -0.59
SND1-201ENST00000354725 EURLQ9NYK6 297 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 CNOT8Q9UFF9 292 aaKnown RBP11.39□□□□□ -0.59
SND1-201ENST00000354725 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 ZNF236Q9UL36 1845 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 TGFB1I1O43294 461 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 SERPINB7O75635 380 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 OXSR1O95747 527 aaPredicted RBP11.39□□□□□ -0.59
SND1-201ENST00000354725 RARAP10276 462 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 ETS2P15036 469 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 NR2F2P24468 414 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 DRG2P55039 364 aaKnown RBP11.39□□□□□ -0.59
SND1-201ENST00000354725 CTAG1AP78358 180 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 ITIH4Q14624 930 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 CERKLQ49MI3 558 aaPredicted RBP11.39□□□□□ -0.59
SND1-201ENST00000354725 C6orf183Q5T699 404 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 TRPM8Q7Z2W7 1104 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 MILR1Q7Z6M3 343 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 ESX1Q8N693 406 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 VPS50Q96JG6 964 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 REEP2Q9BRK0 252 aa11.39□□□□□ -0.59
SND1-201ENST00000354725 PSTPIP2Q9H939 334 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms