RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 MAP2K2P36507 400 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 WDR72Q3MJ13 1102 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 EAPPQ56P03 285 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-201ENST00000354547 TRAPPC12Q8WVT3 735 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 PRCCQ92733 491 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-201ENST00000354547 KLHL29Q96CT2 875 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 PPP1R16BQ96T49 567 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 NRBP2Q9NSY0 501 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 L3MBTL1Q9Y468 752 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 AFG3L2Q9Y4W6 797 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 FAM47DPA6NHR8 397 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 A8MUI8 341 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 CSDE1O75534 798 aaKnown RBP20.63■□□□□ 0.89
COL13A1-201ENST00000354547 RFC1P35251 1148 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-201ENST00000354547 OAZ1P54368 228 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 CDH8P55286 799 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 NCAPG2Q86XI2 1143 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 ALLCQ8N6M5 410 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 VPS33BQ9H267 617 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 TRABDQ9H4I3 376 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 GINM1Q9NU53 330 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 HOXC10Q9NYD6 342 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 ADAMTS5Q9UNA0 930 aa20.63■□□□□ 0.89
COL13A1-201ENST00000354547 CALB1P05937 261 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 TAC1P20366 129 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 PSMA2P25787 234 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 GCAP28676 217 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 NRLP54845 237 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 LMNB2Q03252 620 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 BRSK2Q8IWQ3 736 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 R3HDMLQ9H3Y0 253 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 KLHL14Q9P2G3 628 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 LGALS13Q9UHV8 139 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 A0A1W2PPM1 405 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 LACTBP83111 547 aaPredicted RBP20.62■□□□□ 0.89
COL13A1-201ENST00000354547 MGAT5Q09328 741 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 ZNF699Q32M78 642 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 TFDP3Q5H9I0 405 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 DENND1BQ6P3S1 775 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 RHPN2Q8IUC4 686 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 JOSD2Q8TAC2 188 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 MAML1Q92585 1016 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 MAGEB18Q96M61 343 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 NLRP4Q96MN2 994 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 KCNG1Q9UIX4 513 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 hCG_1818297A0A087WSY0 165 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 PIK3R2O00459 728 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 PIGRP01833 764 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 GSTA1P08263 222 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 GDF10P55107 478 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 IL9RQ01113 521 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 EFTUD2Q15029 972 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL13A1-201ENST00000354547 TREML2Q5T2D2 321 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 NIF3L1Q9GZT8 377 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 SYNCQ9H7C4 482 aa20.62■□□□□ 0.89
COL13A1-201ENST00000354547 WDR91A4D1P6 747 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 TCEA3O75764 348 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 FARP2O94887 1054 aaPredicted RBP20.61■□□□□ 0.89
COL13A1-201ENST00000354547 RPSAP08865 295 aaKnown RBP20.61■□□□□ 0.89
COL13A1-201ENST00000354547 CA4P22748 312 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 DUOXA2Q1HG44 320 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 CNTN6Q9UQ52 1028 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 CD48P09326 243 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 ABCD1P33897 745 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 RPA3P35244 121 aaPredicted RBP20.61■□□□□ 0.89
COL13A1-201ENST00000354547 ALDH5A1P51649 535 aaPredicted RBP20.61■□□□□ 0.89
COL13A1-201ENST00000354547 ZNF132P52740 706 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 VCPP55072 806 aaKnown RBP20.61■□□□□ 0.89
COL13A1-201ENST00000354547 COPS2P61201 443 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 PPP1R21Q6ZMI0 780 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 ACTL9Q8TC94 416 aa20.61■□□□□ 0.89
COL13A1-201ENST00000354547 MRPL4Q9BYD3 311 aaKnown RBP20.61■□□□□ 0.89
COL13A1-201ENST00000354547 C19orf81C9J6K1 198 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 INO80B-WBP1J3KQ70 363 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 B4GALT5O43286 388 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 CST8O60676 142 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 STAM2O75886 525 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 ATG7O95352 703 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 PRKCBP05771 671 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 NQO1P15559 274 aaKnown RBP20.6■□□□□ 0.89
COL13A1-201ENST00000354547 SSTR1P30872 391 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 CDKN2BP42772 138 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 OTUD4Q01804 1114 aaKnown RBP20.6■□□□□ 0.89
COL13A1-201ENST00000354547 ENPEPQ07075 957 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 TRABD2AQ86V40 505 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 TRPM4Q8TD43 1214 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 KLF6Q99612 283 aaPredicted RBP20.6■□□□□ 0.89
COL13A1-201ENST00000354547 INO80BQ9C086 356 aaPredicted RBP20.6■□□□□ 0.89
COL13A1-201ENST00000354547 C12orf65Q9H3J6 166 aaKnown RBP20.6■□□□□ 0.89
COL13A1-201ENST00000354547 GOLGA8RI6L899 631 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 MSCO60682 206 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 TOM1L1O75674 476 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 LAMTOR4Q0VGL1 99 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 ANKRD22Q5VYY1 191 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 NIFKQ9BYG3 293 aaKnown RBP20.6■□□□□ 0.89
COL13A1-201ENST00000354547 GGA3Q9NZ52 723 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 CEP83Q9Y592 693 aa20.6■□□□□ 0.89
COL13A1-201ENST00000354547 KRT16P08779 473 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 IL1R2P27930 398 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms