RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 EPN2O95208 641 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 NT5C2P49902 561 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 ZNF211Q13398 564 aaPredicted RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 C11orf96Q7Z7L8 435 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 ALLCQ8N6M5 410 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 METTL13Q8N6R0 699 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 DHRS1Q96LJ7 313 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 ACAT2Q9BWD1 397 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 REXO4Q9GZR2 422 aaKnown RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 SH3GLB2Q9NR46 395 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 ABCC3O15438 1527 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 PTPRMP28827 1452 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 H7C0C1 242 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 SIN3BO75182 1162 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 IFNA16P05015 189 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 ATP5OP48047 213 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 CD97P48960 835 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 NKX1-1Q15270 411 aaPredicted RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 TWF2Q6IBS0 349 aaKnown RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 CCDC33Q8N5R6 958 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 SNX31Q8N9S9 440 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 TTC8Q8TAM2 541 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 SUCLG2Q96I99 432 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 CITED4Q96RK1 184 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 LACRTQ9GZZ8 138 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 EML4Q9HC35 981 aaKnown RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 COPRSQ9NQ92 184 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 ETNK2Q9NVF9 386 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 MOSPD1Q9UJG1 213 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 SLC8A2Q9UPR5 921 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 ZBTB1Q9Y2K1 713 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 A6NHS1 94 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 PPP1R3GB7ZBB8 358 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 BTN3A3O00478 584 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 ANXA1P04083 346 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 CCNFP41002 786 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 NUDT2P50583 147 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 TIMM10P62072 90 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 KCNH2Q12809 1159 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 DEPDC1Q5TB30 811 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 PDZD4Q76G19 769 aaPredicted RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 ZNF564Q8TBZ8 553 aaPredicted RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 ZNF507Q8TCN5 953 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 TMA16Q96EY4 203 aaKnown RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 BBS2Q9BXC9 721 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 SLC13A1Q9BZW2 595 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 RBMX2Q9Y388 322 aaKnown RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 JCADQ9P266 1359 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 MAGEB16A2A368 324 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 SNX2O60749 519 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 CYP2C9P11712 490 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 RAB25P57735 213 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 RALGDSQ12967 914 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 PABPC4Q13310 644 aaKnown RBP eCLIP5.25□□□□□ -1.578e-43■■□□□ 12.4
SKP1-202ENST00000353411 TBC1D25Q3MII6 688 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 SPOPLQ6IQ16 392 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 TLDC1Q6P9B6 456 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 C6orf89Q6UWU4 347 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 RIPOR1Q6ZS17 1223 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 CCDC149Q6ZUS6 474 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 SLC35G2Q8TBE7 412 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 PLEKHO2Q8TD55 490 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 CDC42EP4Q9H3Q1 356 aaKnown RBP5.25□□□□□ -1.57
SKP1-202ENST00000353411 CYP26B1Q9NR63 512 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 EMILIN3Q9NT22 766 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 AGAP1Q9UPQ3 857 aa5.25□□□□□ -1.57
SKP1-202ENST00000353411 CCNKO75909 580 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 RHOBTB3O94955 611 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 HALP42357 657 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 ERVK-9P63128 1117 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 SULT2A1Q06520 285 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 MAPK11Q15759 364 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 SATL1Q86VE3 508 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 APOL6Q9BWW8 343 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 MCM9Q9NXL9 1143 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 TDRKHQ9Y2W6 561 aaKnown RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 AFG3L2Q9Y4W6 797 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 CCDC78A2IDD5 438 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 A6NJR5 290 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 FOXN1O15353 648 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 COILP38432 576 aaPredicted RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 SERPINH1P50454 418 aaKnown RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 CYP2J2P51589 502 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 AKR1D1P51857 326 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 ATP2C1P98194 919 aaPredicted RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 UBE3CQ15386 1083 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 TMTC4Q5T4D3 741 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 KLHDC7AQ5VTJ3 777 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 MTERF3Q96E29 417 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 UBE2OQ9C0C9 1292 aaKnown RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 TRPV5Q9NQA5 729 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 IPO11Q9UI26 975 aaKnown RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 ERVK-7P63135 1459 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 ARHGEF35A5YM69 484 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 FCHO1O14526 889 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 LRRN2O75325 713 aa5.24□□□□□ -1.57
SKP1-202ENST00000353411 FARP2O94887 1054 aaPredicted RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 ASS1P00966 412 aaKnown RBP5.24□□□□□ -1.57
SKP1-202ENST00000353411 ITGAXP20702 1163 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms