RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 FSCN2O14926 492 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 CLIC2O15247 247 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 FOXD2O60548 495 aaPredicted RBP13.91□□□□□ -0.18
IFT88-202ENST00000351808 STAMBPO95630 424 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 ZBED1O96006 694 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 CD48P09326 243 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 RBP3P10745 1247 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 EPHB1P54762 984 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 IGBP1P78318 339 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 PRPF39Q86UA1 669 aaKnown RBP13.91□□□□□ -0.18
IFT88-202ENST00000351808 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 HERPUD2Q9BSE4 406 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 GPR88Q9GZN0 384 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 THEGQ9P2T0 379 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 RSL24D1Q9UHA3 163 aaKnown RBP13.91□□□□□ -0.18
IFT88-202ENST00000351808 TAGLN3Q9UI15 199 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 MAD2L2Q9UI95 211 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 DTNAQ9Y4J8 743 aa13.91□□□□□ -0.18
IFT88-202ENST00000351808 GPC6Q9Y625 555 aaPredicted RBP13.91□□□□□ -0.18
IFT88-202ENST00000351808 PHRF1Q9P1Y6 1649 aaKnown RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 E5RJQ4 531 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 TRPA1O75762 1119 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 CYP2D6P10635 497 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 RAG1P15918 1043 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 IL6STP40189 918 aaPredicted RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 BCAP31P51572 246 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 GPC5P78333 572 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 SLC25A3Q00325 362 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 CCNIQ14094 377 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 HIC1Q14526 733 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 SYCP2LQ5T4T6 812 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 BORAQ6PGQ7 559 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 KYAT3Q6YP21 454 aaKnown RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 GPBP1Q86WP2 473 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 TMIGD2Q96BF3 282 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 CCDC124Q96CT7 223 aaKnown RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 OSBPL6Q9BZF3 934 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 IL17RBQ9NRM6 502 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 UVRAGQ9P2Y5 699 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 KIF13BQ9NQT8 1826 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 SCN11AQ9UI33 1791 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 POTECB2RU33 542 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 DENRO43583 198 aaKnown RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 ITM2AO43736 263 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 FUCA1P04066 466 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 OCM2P0CE71 109 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 OCMP0CE72 109 aaPredicted RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 BGNP21810 368 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 EIF2B2P49770 351 aaKnown RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 CTSWP56202 376 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 PDE1CQ14123 709 aaPredicted RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 ZNF423Q2M1K9 1284 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 ANO5Q75V66 913 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 AMIGO2Q86SJ2 522 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 THEMISQ8N1K5 641 aaPredicted RBP13.9□□□□□ -0.18
IFT88-202ENST00000351808 RAB34Q9BZG1 259 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 VPS11Q9H270 941 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 USP54Q70EL1 1684 aa13.9□□□□□ -0.18
IFT88-202ENST00000351808 A0A1B0GTW7 788 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 TNFAIP8O95379 198 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 THRAP10827 490 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 NR1H2P55055 460 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 RPL26P61254 145 aaKnown RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 ARHGAP4P98171 946 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 CD300CQ08708 224 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 EFTUD2Q15029 972 aaKnown RBP eCLIP13.89□□□□□ -0.19
IFT88-202ENST00000351808 FAM91A1Q658Y4 838 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 C14orf80Q86SX3 495 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 RELL1Q8IUW5 271 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 RNF169Q8NCN4 708 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 CSRNP1Q96S65 589 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 AGPAT1Q99943 283 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 DRC3Q9H069 523 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 KCNQ5Q9NR82 932 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 TRNAU1APQ9NX07 287 aaKnown RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 PLK2Q9NYY3 685 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 MAD1L1Q9Y6D9 718 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 HOXD13P35453 343 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 PHKA2P46019 1235 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 PDIA2Q13087 525 aaKnown RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 HSF5Q4G112 596 aaPredicted RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 NEPROQ6NW34 567 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 NSMFQ6X4W1 530 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 SYDE1Q6ZW31 735 aaPredicted RBP13.89□□□□□ -0.19
IFT88-202ENST00000351808 DDI1Q8WTU0 396 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 PYROXD1Q8WU10 500 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 DCLK3Q9C098 648 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 TPK1Q9H3S4 243 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 PSTPIP2Q9H939 334 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 C6orf50Q9HD87 102 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 NUP188Q5SRE5 1749 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 PRR5-ARHGAP8B1AHC4 643 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
IFT88-202ENST00000351808 FOXN3O00409 490 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms