RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 CENPCQ03188 943 aa12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 NRF1Q16656 503 aa12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 IFNEQ86WN2 208 aa12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 RYBPQ8N488 228 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 MARCH7Q9H992 704 aa12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 C6orf203Q9P0P8 240 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ATP6V1HQ9UI12 483 aa12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZNF232Q9UNY5 417 aa12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 V9GYQ6 96 aa12.3□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CENPXA8MT69 81 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 VWA5AO00534 786 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ABL1P00519 1130 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 S100A9P06702 114 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZNF12P17014 697 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ATF4P18848 351 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 RPL21P46778 160 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 XIAPP98170 497 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 LAMC2Q13753 1193 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 WRNIP1Q96S55 665 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ENO2P09104 434 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TPBGLP0DKB5 382 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TJAP1Q5JTD0 557 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 GPR107Q5VW38 600 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZBTB18Q99592 522 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CACYBPQ9HB71 228 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 IP6K2Q9UHH9 426 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZNF23P17027 643 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 PFKFB3Q16875 520 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 PCYOX1LQ8NBM8 494 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 GPATCH1Q9BRR8 931 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ASLP04424 464 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 POLR2MP0CAP2 368 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 PHKA1P46020 1223 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 BFSP2Q13515 415 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 C11orf91Q3C1V1 193 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 LCORLQ8N3X6 602 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 POC5Q8NA72 575 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 C7orf25Q9BPX7 421 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 EPS8L2Q9H6S3 715 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 GRID1Q9ULK0 1009 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TRIM49D1C9J1S8 452 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 SERPINB9P50453 376 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 AUHQ13825 339 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CAPRIN1Q14444 709 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 NDUFAF2Q8N183 169 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ATXN7L3BQ96GX2 97 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZNF333Q96JL9 665 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZSWIM1Q9BR11 485 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 SEMA6AQ9H2E6 1030 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 EFCAB1Q9HAE3 211 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 LMCD1Q9NZU5 365 aa12.29□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CPDO75976 1380 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TRPM1Q7Z4N2 1603 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CFBP00751 764 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 MMP13P45452 471 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 SPIDRQ14159 915 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TBC1D10BQ4KMP7 808 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 NAALADL2Q58DX5 795 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 POU5F2Q8N7G0 328 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 IL1RL2Q9HB29 575 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 AP4B1Q9Y6B7 739 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 H0YC42 278 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TLR3O15455 904 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 MED26O95402 600 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 P4HA1P13674 534 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 GCLMP48507 274 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 DMP1Q13316 513 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZC3H12BQ5HYM0 836 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TRAPPC3LQ5T215 181 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 LPCAT4Q643R3 524 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 QKIQ96PU8 341 aaKnown RBP eCLIP12.28□□□□□ -0.445e-7■■■■■ 58.8
CDK5RAP2-201ENST00000349780 ABCB10Q9NRK6 738 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 POLD3Q15054 466 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CLEC4MQ9H2X3 399 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZC3H7BQ9UGR2 993 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 NAGPAQ9UK23 515 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 EVPLLA8MZ36 301 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CLOCKO15516 846 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TNFRSF21O75509 655 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 SLC9A1P19634 815 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 RFX1P22670 979 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 RIN3Q8TB24 985 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 DENND2DQ9H6A0 471 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 PIDD1Q9HB75 910 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 EML4Q9HC35 981 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 SLAIN2Q9P270 581 aa12.28□□□□□ -0.44
CDK5RAP2-201ENST00000349780 SNPHO15079 494 aa12.27□□□□□ -0.44
CDK5RAP2-201ENST00000349780 ZNF862O60290 1169 aa12.27□□□□□ -0.44
CDK5RAP2-201ENST00000349780 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.44
CDK5RAP2-201ENST00000349780 CCNA2P20248 432 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms