RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 TMEM143Q96AN5 459 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 ACAP3Q96P50 834 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 TAS2R14Q9NYV8 317 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 APOL1O14791 398 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 NOL4O94818 638 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 KCNA3P22001 575 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 RRM1P23921 792 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 PPP1R16BQ96T49 567 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 VPS11Q9H270 941 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 LRRC4Q9HBW1 653 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 ARFGEF2Q9Y6D5 1785 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 ZC3H11AO75152 810 aaKnown RBP eCLIP15.46■□□□□ 0.064e-9■□□□□ 10.5
NUP50-201ENST00000347635 PROSCO94903 275 aa15.46■□□□□ 0.06
NUP50-201ENST00000347635 CUL2Q13617 745 aa15.46■□□□□ 0.06
NUP50-201ENST00000347635 GRIK5Q16478 980 aa15.46■□□□□ 0.06
NUP50-201ENST00000347635 C2CD6Q53TS8 623 aa15.46■□□□□ 0.06
NUP50-201ENST00000347635 DUPD1Q68J44 220 aa15.46■□□□□ 0.06
NUP50-201ENST00000347635 LBHD1Q9BQE6 289 aaPredicted RBP15.46■□□□□ 0.06
NUP50-201ENST00000347635 TRIM56Q9BRZ2 755 aaKnown RBP15.46■□□□□ 0.06
NUP50-201ENST00000347635 KPNA7A9QM74 516 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 KCNN4O15554 427 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 SPAG6O75602 509 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 PPATQ06203 517 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 SLC30A9Q6PML9 568 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 OTOP1Q7RTM1 612 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 PPWD1Q96BP3 646 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 POP1Q99575 1024 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 PCYOX1Q9UHG3 505 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 SLC12A6Q9UHW9 1150 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 CYP3A7-CYP3A51PA0A087WV96 503 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 MAPTP10636 758 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 CYP3A7P24462 503 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 EMC2Q15006 297 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 HEATR6Q6AI08 1181 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 TMC2Q8TDI7 906 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 KRT35Q92764 455 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 DNAJC18Q9H819 358 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 DONSONQ9NYP3 566 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 ERAP1Q9NZ08 941 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 WDR35Q9P2L0 1181 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 C15orf41Q9Y2V0 281 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 MANSC4A6NHS7 340 aaPredicted RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 RPLP2P05387 115 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 GSTA2P09210 222 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 CTCFP49711 727 aaPredicted RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 HYIQ5T013 277 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 PLEKHH3Q7Z736 793 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 DNERQ8NFT8 737 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 TAS1R2Q8TE23 839 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 CYP4F11Q9HBI6 524 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 ABCF3Q9NUQ8 709 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 ZC3H7BQ9UGR2 993 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 SETD1AO15047 1707 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 ROBO3Q96MS0 1386 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 EML1O00423 815 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 CST8O60676 142 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 DSG3P32926 999 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 KPNA2P52292 529 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 OVGP1Q12889 678 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 DAB2IPQ5VWQ8 1189 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 KIRREL3Q8IZU9 778 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 RASGEF1CQ8N431 466 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 EFHD1Q9BUP0 239 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 FHDC1Q9C0D6 1143 aaPredicted RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 DDX4Q9NQI0 724 aaKnown RBP15.45■□□□□ 0.06
NUP50-201ENST00000347635 NINJ2Q9NZG7 142 aa15.45■□□□□ 0.06
NUP50-201ENST00000347635 HOXC6P09630 235 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 TAL1P17542 331 aaPredicted RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 CPT1AP50416 773 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 STX1BP61266 288 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 MRPS9P82933 396 aaKnown RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 CNGA2Q16280 664 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 SGSM1Q2NKQ1 1148 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 TTC39BQ5VTQ0 682 aaPredicted RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 EXD1Q8NHP7 514 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 MKL1Q969V6 931 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 FLT3P36888 993 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 PRKCEQ02156 737 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 MORF4L2Q15014 288 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 TAF1BQ53T94 588 aaPredicted RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 RASSF3Q86WH2 238 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP50-201ENST00000347635 DHX38Q92620 1227 aaKnown RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 ACSF2Q96CM8 615 aaPredicted RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 TAAR1Q96RJ0 339 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 TRIM33Q9UPN9 1127 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 AHDC1Q5TGY3 1603 aaPredicted RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 DGKDQ16760 1214 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 ICA1LQ8NDH6 482 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 RAB6BQ9NRW1 208 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 B2RBV5 119 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 PIK3CDO00329 1044 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 PPM1FP49593 454 aaPredicted RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 DRG2P55039 364 aaKnown RBP15.44■□□□□ 0.06
NUP50-201ENST00000347635 RHBDL3P58872 404 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 DEUP1Q05D60 604 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 QPCTQ16769 361 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 SMTNL2Q2TAL5 461 aa15.44■□□□□ 0.06
NUP50-201ENST00000347635 IER5Q5VY09 327 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms