RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 ZFP42Q96MM3 310 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 CPXM1Q96SM3 734 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 HERPUD2Q9BSE4 406 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 C10orf88Q9H8K7 445 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 COX16Q9P0S2 106 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 TTC7AQ9ULT0 858 aaPredicted RBP18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 A8MXQ7 604 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 SYF2O95926 243 aaKnown RBP18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 CALB1P05937 261 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 PAN2Q504Q3 1202 aaKnown RBP18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 SLC27A1Q6PCB7 646 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 TMEM176AQ96HP8 235 aa18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 SAE1Q9UBE0 346 aaPredicted RBP18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 R3HDM2Q9Y2K5 976 aaKnown RBP18.17■□□□□ 0.5
SMARCC2-202ENST00000347471 M0QZ92 97 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 ECEL1O95672 775 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 MMP8P22894 467 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 RAD23BP54727 409 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 CALCOCO2Q13137 446 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 HP1BP3Q5SSJ5 553 aaPredicted RBP18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 CALN1Q9BXU9 219 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 GPBP1L1Q9HC44 474 aaPredicted RBP18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 ADCY8P40145 1251 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 CAPN12Q6ZSI9 719 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 ERP44Q9BS26 406 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 ASB7Q9H672 318 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 FAM53CQ9NYF3 392 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 WDR81Q562E7 1941 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 LOC102724159A0A0B4J2E5 919 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 MED7O43513 233 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 MICAL2O94851 1124 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 MAP3K6O95382 1288 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 F2P00734 622 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 SLCO1A2P46721 670 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 SNX17Q15036 470 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 PWP2Q15269 919 aaKnown RBP18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 FAM76AQ8TAV0 307 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 MRPL45Q9BRJ2 306 aaKnown RBP18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 FAM107BQ9H098 131 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 SPC25Q9HBM1 224 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 NGRNQ9NPE2 291 aaKnown RBP18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 MED4Q9NPJ6 270 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 ZNF148Q9UQR1 794 aa18.16■□□□□ 0.5
SMARCC2-202ENST00000347471 RBM47A0AV96 593 aaKnown RBP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 CES2O00748 559 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 HOXA11P31270 313 aaPredicted RBP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 KRT17Q04695 432 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 MORN1Q5T089 497 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 ZNF365Q70YC5 407 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 IPO4Q8TEX9 1081 aaKnown RBP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 OSBPL8Q9BZF1 889 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 TSPAN16Q9UKR8 245 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 GNEQ9Y223 722 aaKnown RBP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 AGPSO00116 658 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 DARSP14868 501 aaKnown RBP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 OGDHQ02218 1023 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 WDTC1Q8N5D0 677 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 SLC4A11Q8NBS3 891 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 BEST2Q8NFU1 509 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 LPPQ93052 612 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 APBA2Q99767 749 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 CYTH4Q9UIA0 394 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 TIMM13Q9Y5L4 95 aaPredicted RBP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 OPA1O60313 960 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 COILP38432 576 aaPredicted RBP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 SF3A3Q12874 501 aaKnown RBP eCLIP18.15■□□□□ 0.54e-11■■■■■ 39.5
SMARCC2-202ENST00000347471 KRT71Q3SY84 523 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 ZNF410Q86VK4 478 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 AVENQ9NQS1 362 aaPredicted RBP18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 IP6K2Q9UHH9 426 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 INPP5FQ9Y2H2 1132 aa18.15■□□□□ 0.5
SMARCC2-202ENST00000347471 TULP2O00295 520 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 AOC2O75106 756 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 CTGFP29279 349 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 CHRNA3P32297 505 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 CUL1Q13616 776 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 GOLGA7BQ2TAP0 167 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 C17orf99Q6UX52 265 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 WHAMMQ8TF30 809 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 MRRFQ96E11 262 aaKnown RBP18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 NT5C1AQ9BXI3 368 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 MEIS3P2A8K0S8 358 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 ACAT1P24752 427 aaKnown RBP18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 CCDC142Q17RM4 750 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 SYCP2LQ5T4T6 812 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 EMID1Q96A84 441 aaPredicted RBP18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 LRRC45Q96CN5 670 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 PWWP2AQ96N64 755 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 AKR1A1P14550 325 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 HSD17B3P37058 310 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 RPL21P46778 160 aaKnown RBP18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 PRKCZQ05513 592 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 NNTQ13423 1086 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 MFSD7Q6UXD7 560 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 PHF13Q86YI8 300 aaPredicted RBP18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 FAM114A2Q9NRY5 505 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 HESX1Q9UBX0 185 aa18.14■□□□□ 0.49
SMARCC2-202ENST00000347471 NBPF20Q3BBV1 942 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms