RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 CCDC60Q8IWA6 550 aaPredicted RBP12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 DDX56Q9NY93 547 aaKnown RBP12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 RGS12O14924 1447 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 PDHXO00330 501 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 URODP06132 367 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 VEGFAP15692 232 aaPredicted RBP12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 IFNAR1P17181 557 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 TMEM132BQ14DG7 1078 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 DDI1Q8WTU0 396 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 NPHS2Q9NP85 383 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 SNX8Q9Y5X2 465 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 TEX33O43247 280 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 AKAP5P24588 427 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 NUP62P37198 522 aaPredicted RBP12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 NCOA4Q13772 614 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 ANO5Q75V66 913 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 BNIPLQ7Z465 357 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 ATG4CQ96DT6 458 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 SNF8Q96H20 258 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 RNASEH1O60930 286 aaKnown RBP12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 LRRC8BQ6P9F7 803 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 PLEKHH3Q7Z736 793 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 RHOT1Q8IXI2 618 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 PRMT1Q99873 361 aaKnown RBP12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 PKD2L2Q9NZM6 624 aa12.77□□□□□ -0.37
TRIOBP-202ENST00000344404 PLOD1Q02809 727 aaPredicted RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 INPP5AQ14642 412 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 PRAMEF19Q5SWL8 479 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 OTOAQ7RTW8 1153 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 SLITRK1Q96PX8 696 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 MSRAQ9UJ68 235 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 CD2BP2O95400 341 aaKnown RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 ITGAXP20702 1163 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 SERPINB3P29508 390 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 RBP5P82980 135 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 PRKCEQ02156 737 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 CASP8Q14790 479 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 VPS72Q15906 364 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 BBS7Q8IWZ6 715 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 DHX40Q8IX18 779 aaKnown RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 THTPAQ9BU02 230 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 RIMS1Q86UR5 1692 aaKnown RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 HEATR9A2RTY3 570 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 NDUFS2O75306 463 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 FAM107AO95990 144 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 STAG3L1P0CL83 205 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 ALDH9A1P49189 494 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 CNGA3Q16281 694 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 HIST2H2ACQ16777 129 aaPredicted RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 P3H1Q32P28 736 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 HIST2H2AA3Q6FI13 130 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 SGF29Q96ES7 293 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 RPRD1BQ9NQG5 326 aaKnown RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 PAIP2BQ9ULR5 123 aaKnown RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 SHROOM2Q13796 1616 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 RGS5O15539 181 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 PEX1O43933 1283 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 STARD3Q14849 445 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 OSBPL5Q9H0X9 879 aaPredicted RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 ABHD10Q9NUJ1 306 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 WWOXQ9NZC7 414 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 LIMA1Q9UHB6 759 aaKnown RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 RANBP1P43487 201 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 GSTA3Q16772 222 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 OSBPL6Q9BZF3 934 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 EPN3Q9H201 632 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 FBXO28Q9NVF7 368 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 AIM2O14862 343 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 SERPINB10P48595 397 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 ZNF177Q13360 481 aaPredicted RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 SCARA3Q6AZY7 606 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 USP6NLQ92738 828 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 EPC1Q9H2F5 836 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 SH3GLB2Q9NR46 395 aa12.76□□□□□ -0.37
TRIOBP-202ENST00000344404 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 CCDC15Q0P6D6 951 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 EIF2B5Q13144 721 aaKnown RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 SV2CQ496J9 727 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 RARS2Q5T160 578 aaKnown RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 DOK6Q6PKX4 331 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 FRMD6Q96NE9 622 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 MED15Q96RN5 788 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 TIMM13Q9Y5L4 95 aaPredicted RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 FLT1P17948 1338 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 IQCMA0A1B0GVH7 501 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 ITGB3P05106 788 aa12.75□□□□□ -0.37
TRIOBP-202ENST00000344404 PRIM2P49643 509 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms