RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 VDRP11473 427 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 RAP1GAPP47736 663 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 PARP9Q8IXQ6 854 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 ATP8B4Q8TF62 1192 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 ATG4AQ8WYN0 398 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 FAM237AA0A1B0GTK4 181 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 KCNK18Q7Z418 384 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 CYFIP2Q96F07 1278 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 TRIM4Q9C037 500 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 PCMTD2Q9NV79 361 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 ATRNO75882 1429 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 EML1O00423 815 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 CHUKO15111 745 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 MTM1Q13496 603 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 BOLA3Q53S33 107 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 PIP4K2CQ8TBX8 421 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 TSR3Q9UJK0 312 aaKnown RBP20.18■□□□□ 0.82
SH2B3-201ENST00000341259 CCDC78A2IDD5 438 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 LAMTOR4Q0VGL1 99 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 SV2AQ7L0J3 742 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 RIBC1Q8N443 379 aaPredicted RBP20.18■□□□□ 0.82
SH2B3-201ENST00000341259 ULK4Q96C45 1275 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 RANBP17Q9H2T7 1088 aaKnown RBP20.18■□□□□ 0.82
SH2B3-201ENST00000341259 FAM8A1Q9UBU6 413 aa20.18■□□□□ 0.82
SH2B3-201ENST00000341259 CYP3A4P08684 503 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 NCAM1P13591 858 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 SLC26A2P50443 739 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 IMPG1Q17R60 797 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 CLEC16AQ2KHT3 1053 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 SEPT5Q99719 369 aaPredicted RBP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 AIPL1Q9NZN9 384 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 KDM4FA0A1W2PPD8 638 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 CYP2C8P10632 490 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 H2AFXP16104 143 aaPredicted RBP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 EPHX2P34913 555 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 RGS9BPQ6ZS82 235 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 EGFL8Q99944 293 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 FUT8Q9BYC5 575 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 USP15Q9Y4E8 981 aaPredicted RBP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 PPFIA2O75334 1257 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 HADHAP40939 763 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 EFTUD2Q15029 972 aaKnown RBP eCLIP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 DNAAF5Q86Y56 855 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 NPHS2Q9NP85 383 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 RRM1P23921 792 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 RGS2P41220 211 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 OAZ1P54368 228 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 KRT33BQ14525 404 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 OPTNQ96CV9 577 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 SUDS3Q9H7L9 328 aaPredicted RBP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 TRPC7Q9HCX4 862 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 MRPL40Q9NQ50 206 aaKnown RBP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 OLA1Q9NTK5 396 aaKnown RBP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 STOML1Q9UBI4 398 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 MYL6P60660 151 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 SNX17Q15036 470 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 RBBP7Q16576 425 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 LY6KQ17RY6 165 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 C4orf22Q6V702 233 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 ACOT1Q86TX2 421 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 MKL1Q969V6 931 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 ZNF518BQ9C0D4 1074 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 EML4Q9HC35 981 aaKnown RBP20.17■□□□□ 0.82
SH2B3-201ENST00000341259 NDFIP2Q9NV92 336 aa20.17■□□□□ 0.82
SH2B3-201ENST00000341259 OR1G1P47890 313 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 GCLCP48506 637 aaPredicted RBP20.16■□□□□ 0.82
SH2B3-201ENST00000341259 CTCFP49711 727 aaPredicted RBP20.16■□□□□ 0.82
SH2B3-201ENST00000341259 KIZQ2M2Z5 673 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 PABPC5Q96DU9 382 aaKnown RBP20.16■□□□□ 0.82
SH2B3-201ENST00000341259 CATSPERBQ9H7T0 1116 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 CYP4F11Q9HBI6 524 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 ALDH18A1P54886 795 aaKnown RBP20.16■□□□□ 0.82
SH2B3-201ENST00000341259 TTC39BQ5VTQ0 682 aaPredicted RBP20.16■□□□□ 0.82
SH2B3-201ENST00000341259 KCNV2Q8TDN2 545 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 N4BP2L2Q92802 583 aaPredicted RBP20.16■□□□□ 0.82
SH2B3-201ENST00000341259 SEC16BQ96JE7 1060 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 SREBF2Q12772 1141 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 NCLNQ969V3 563 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 MRC1P22897 1456 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 MON2Q7Z3U7 1717 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 TMCO4Q5TGY1 634 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 ARHGEF19Q8IW93 802 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 LRRC43Q8N309 656 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 KLF6Q99612 283 aaPredicted RBP20.16■□□□□ 0.82
SH2B3-201ENST00000341259 PSD3Q9NYI0 1048 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 KIAA1257Q9ULG3 409 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 SYNPO2Q9UMS6 1093 aa20.16■□□□□ 0.82
SH2B3-201ENST00000341259 ESRRGP62508 458 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 PTPRN2Q92932 1015 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 TATDN2Q93075 761 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
SH2B3-201ENST00000341259 IRAK1P51617 712 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 STX3Q13277 289 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 FRMD8P1Q9BZ68 369 aaPredicted RBP20.15■□□□□ 0.82
SH2B3-201ENST00000341259 CISHQ9NSE2 258 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 ADA2Q9NZK5 511 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 IFT172Q9UG01 1749 aa20.15■□□□□ 0.82
SH2B3-201ENST00000341259 TMEM150BA6NC51 233 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms