RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CLEC16AQ2KHT3 1053 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 DSTYKQ6XUX3 929 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 TRIM72Q6ZMU5 477 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 OTOP2Q7RTS6 562 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 TMCO2Q7Z6W1 182 aaPredicted RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 KIAA1328Q86T90 577 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 DNAAF5Q86Y56 855 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 OR6B3Q8NGW1 331 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 HASPINQ8TF76 798 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 DPEP3Q9H4B8 488 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 LUC7LQ9NQ29 371 aaKnown RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 SEPT11Q9NVA2 429 aaKnown RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 MARCH5Q9NX47 278 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 TRIM10Q9UDY6 481 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 INTUQ9ULD6 942 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 A8MXQ7 604 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 I3L4J1 428 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 O00370 1275 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 RTN2O75298 545 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 GALTP07902 379 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 ODC1P11926 461 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 NOMO3P69849 1222 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 CENPCQ03188 943 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 TMEM240Q5SV17 173 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 ZNF365Q70YC5 407 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 C12orf29Q8N999 325 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 CYFIP2Q96F07 1278 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 HEXIM2Q96MH2 286 aaKnown RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 CWH43Q9H720 699 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 LZTFL1Q9NQ48 299 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 PUF60Q9UHX1 559 aaKnown RBP8.33□□□□□ -1.08
TMC1-202ENST00000340019 DUSP10Q9Y6W6 482 aa8.33□□□□□ -1.08
TMC1-202ENST00000340019 BTNL10A8MVZ5 291 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 TMCO5BA8MYB1 307 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 MED7O43513 233 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 FGBP02675 491 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 FTLP02792 175 aaPredicted RBP8.32□□□□□ -1.08
TMC1-202ENST00000340019 ALDH2P05091 517 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 LHX1P48742 406 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 SLC11A1P49279 550 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 GALCP54803 685 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 KIF5AQ12840 1032 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 CNGA2Q16280 664 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 KIAA0319Q5VV43 1072 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 ACAD10Q6JQN1 1059 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 ACOT1Q86TX2 421 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 WDTC1Q8N5D0 677 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 RTP3Q9BQQ7 232 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 TSGA10Q9BZW7 698 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 LHX5Q9H2C1 402 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 SNX25Q9H3E2 840 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 DSEQ9UL01 958 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.32□□□□□ -1.08
TMC1-202ENST00000340019 TIMM13Q9Y5L4 95 aaPredicted RBP8.32□□□□□ -1.08
TMC1-202ENST00000340019 KIAA1671Q9BY89 1806 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 ANKRD62A6NC57 917 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 LSM8O95777 96 aaKnown RBP8.32□□□□□ -1.08
TMC1-202ENST00000340019 EFEMP2O95967 443 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 H2AFZP0C0S5 128 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 CD19P15391 556 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 SYN1P17600 705 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 TYMPP19971 482 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 SSTR3P32745 418 aaPredicted RBP8.32□□□□□ -1.08
TMC1-202ENST00000340019 ARHGAP29Q52LW3 1261 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 SGO2Q562F6 1265 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 ARHGAP17Q68EM7 881 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 PSRC1Q6PGN9 363 aaPredicted RBP8.32□□□□□ -1.08
TMC1-202ENST00000340019 LCLAT1Q6UWP7 414 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 H2AFVQ71UI9 128 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 PASD1Q8IV76 773 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 TXLNBQ8N3L3 684 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.32□□□□□ -1.08
TMC1-202ENST00000340019 DDX43Q9NXZ2 648 aaKnown RBP8.32□□□□□ -1.08
TMC1-202ENST00000340019 SALL4Q9UJQ4 1053 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 PCDHB8Q9UN66 801 aa8.32□□□□□ -1.08
TMC1-202ENST00000340019 PRG3Q9Y2Y8 225 aaPredicted RBP8.32□□□□□ -1.08
TMC1-202ENST00000340019 KRT86O43790 486 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 MICAL2O94851 1124 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 PDGFRBP09619 1106 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 TMEM253P0C7T8 217 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 BCAR1P56945 870 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 PKDCCQ504Y2 493 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 PPP1R26Q5T8A7 1209 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 NAA35Q5VZE5 725 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 TMEM173Q86WV6 379 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 PHF13Q86YI8 300 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 CMTR2Q8IYT2 770 aaKnown RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 B3GALNT2Q8NCR0 500 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 TNIP3Q96KP6 325 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 COLEC11Q9BWP8 271 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 IRX2Q9BZI1 471 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 ZNF518BQ9C0D4 1074 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 RRAGDQ9NQL2 400 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 CXXC1Q9P0U4 656 aaPredicted RBP8.31□□□□□ -1.08
TMC1-202ENST00000340019 ADAM28Q9UKQ2 775 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 FAN1Q9Y2M0 1017 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 MYH10P35580 1976 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 ARHGEF37A1IGU5 675 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 SYN3O14994 580 aa8.31□□□□□ -1.08
TMC1-202ENST00000340019 TADA2AO75478 443 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms