RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
LITAF-201ENST00000339430 ANAPC5Q9UJX4 755 aa17.28■□□□□ 0.36
LITAF-201ENST00000339430 C5orf60A6NFR6 353 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 SRGAP2CP0DJJ0 459 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 TBXAS1P24557 533 aaPredicted RBP17.27■□□□□ 0.36
LITAF-201ENST00000339430 TNFAIP2Q03169 654 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 OLFML2BQ68BL8 750 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 TRIM72Q6ZMU5 477 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 C3orf20Q8ND61 904 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 GRK7Q8WTQ7 553 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 CENPTQ96BT3 561 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 MTMR12Q9C0I1 747 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 GGA2Q9UJY4 613 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 GABRQQ9UN88 632 aa17.27■□□□□ 0.36
LITAF-201ENST00000339430 GOLGA6L7A0A1B0GV03 622 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 VGLL3A8MV65 326 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 PSTPIP1O43586 416 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 ADCY3O60266 1144 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 FSBPO95073 299 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 KRT10P13645 584 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 CREB1P16220 341 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 CAP1Q01518 475 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 ZNF568Q3ZCX4 644 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 PLEKHA7Q6IQ23 1121 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 PLPPR4Q7Z2D5 763 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 EXOC3L1Q86VI1 746 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 PHF13Q86YI8 300 aaPredicted RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 PPTC7Q8NI37 304 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 FEZF2Q8TBJ5 459 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 MGARPQ8TDB4 240 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 IPO4Q8TEX9 1081 aaKnown RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 EMID1Q96A84 441 aaPredicted RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 JPH2Q9BR39 696 aaPredicted RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 TMEM109Q9BVC6 243 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 OSBPL7Q9BZF2 842 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 IMPG2Q9BZV3 1241 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 RNF186Q9NXI6 227 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 ZNF865P0CJ78 1059 aaPredicted RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 BRD2P25440 801 aaKnown RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 MAN1A1P33908 653 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 MAP2K2P36507 400 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 SP3Q02447 781 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 TARBP2Q15633 366 aaKnown RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 SCARA5Q6ZMJ2 495 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 ZNF365Q70YC5 407 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 LRRC71Q8N4P6 559 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 ACSF2Q96CM8 615 aaPredicted RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 ZNF317Q96PQ6 595 aaPredicted RBP17.26■□□□□ 0.35
LITAF-201ENST00000339430 SMARCAD1Q9H4L7 1026 aa17.26■□□□□ 0.35
LITAF-201ENST00000339430 RFC5P40937 340 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 FLT3LGP49771 235 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 MYL6P60660 151 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 LRRC14Q15048 493 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 GSTA5Q7RTV2 222 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 CROCCP2Q86T23 111 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 KATNAL2Q8IYT4 538 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 LRRC34Q8IZ02 419 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 OR6J1Q8NGC5 347 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 TMEM134Q9H6X4 195 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 PARVAQ9NVD7 372 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 SCINQ9Y6U3 715 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 ATF7P17544 494 aaPredicted RBP17.25■□□□□ 0.35
LITAF-201ENST00000339430 CENPFP49454 3210 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 PRKCZQ05513 592 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 PLCB4Q15147 1175 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 TNFAIP8L3Q5GJ75 292 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 SYDE1Q6ZW31 735 aaPredicted RBP17.25■□□□□ 0.35
LITAF-201ENST00000339430 CCDC13Q8IYE1 715 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
LITAF-201ENST00000339430 VCPIP1Q96JH7 1222 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 FAM167AQ96KS9 214 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 MCEEQ96PE7 176 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 STMN4Q9H169 189 aaPredicted RBP17.25■□□□□ 0.35
LITAF-201ENST00000339430 CNTN6Q9UQ52 1028 aa17.25■□□□□ 0.35
LITAF-201ENST00000339430 TTC4O95801 387 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 IGHA2P01877 340 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 LGALS2P05162 132 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 VIMP08670 466 aaKnown RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 WEE2P0C1S8 567 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 ZNF286BP0CG31 522 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 OSTNP61366 133 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 ACTN3Q08043 901 aaPredicted RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 TAOK1Q7L7X3 1001 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 CDR2LQ86X02 465 aaPredicted RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 BRSK2Q8IWQ3 736 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 ARHGEF2Q92974 986 aaKnown RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 ROPN1BQ9BZX4 212 aaPredicted RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 ROPN1Q9HAT0 212 aaPredicted RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 MLXIPLQ9NP71 852 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 NINJ2Q9NZG7 142 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 TBK1Q9UHD2 729 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 DYNC1LI2O43237 492 aaPredicted RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 MSCO60682 206 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 MAFO75444 373 aaPredicted RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 ASS1P00966 412 aaKnown RBP17.24■□□□□ 0.35
LITAF-201ENST00000339430 MMP8P22894 467 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 SLC26A2P50443 739 aa17.24■□□□□ 0.35
LITAF-201ENST00000339430 CCNG2Q16589 344 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms