RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 C15orf59Q2T9L4 293 aaPredicted RBP9.36□□□□□ -0.91
SNCA-201ENST00000336904 PLEKHA7Q6IQ23 1121 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 ARFGAP1Q8N6T3 406 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 VTI1AQ96AJ9 217 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 HEXIM2Q96MH2 286 aaKnown RBP9.36□□□□□ -0.91
SNCA-201ENST00000336904 PAIP2Q9BPZ3 127 aaKnown RBP9.36□□□□□ -0.91
SNCA-201ENST00000336904 JPH2Q9BR39 696 aaPredicted RBP9.36□□□□□ -0.91
SNCA-201ENST00000336904 ELOVL4Q9GZR5 314 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 TSPYL1Q9H0U9 437 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 ADAM7Q9H2U9 754 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 LRRC19Q9H756 370 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 PARVAQ9NVD7 372 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 NR2E3Q9Y5X4 410 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 POC1B-GALNT4F8VUJ3 575 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 SGK1O00141 431 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 PODXLO00592 558 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 TBXAS1P24557 533 aaPredicted RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 ARSEP51690 589 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 MCL1Q07820 350 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 GPS1Q13098 491 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 AUHQ13825 339 aaKnown RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 TTLL4Q14679 1199 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 ZNF667Q5HYK9 610 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 ZPBP2Q6X784 338 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 IPO4Q8TEX9 1081 aaKnown RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 ANKRD36BP1Q96IX9 119 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 SLITRK1Q96PX8 696 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 CALN1Q9BXU9 219 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 TRIP11Q15643 1979 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 DNAJC25-GNG10A0A024R161 153 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 TMEM191CA6NGB0 347 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 ACKR2O00590 384 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 AKAP5P24588 427 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 IGFBP6P24592 240 aaPredicted RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 EFNA5P52803 228 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 ZNF200P98182 395 aaPredicted RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 KLF1Q13351 362 aaPredicted RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 MXD4Q14582 209 aaPredicted RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 CYP1B1Q16678 543 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 SGSM1Q2NKQ1 1148 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 CPLX4Q7Z7G2 160 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 SRRM1Q8IYB3 904 aaKnown RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 C18orf25Q96B23 403 aaPredicted RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 SNF8Q96H20 258 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 RASSF4Q9H2L5 321 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 C12orf65Q9H3J6 166 aaKnown RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 SMARCAD1Q9H4L7 1026 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 GOLGA2P5Q9HBQ8 144 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 AVENQ9NQS1 362 aaPredicted RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 DDX20Q9UHI6 824 aaKnown RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 MRPL42Q9Y6G3 142 aaKnown RBP9.35□□□□□ -0.91
SNCA-201ENST00000336904 SBF1O95248 1867 aa9.35□□□□□ -0.91
SNCA-201ENST00000336904 GMNCA6NCL1 334 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 SPAG7O75391 227 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 VIMP08670 466 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 TGFB3P10600 412 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 OSBPP22059 807 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 ZNF132P52740 706 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 RAD23BP54727 409 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 EFTUD2Q15029 972 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNCA-201ENST00000336904 SLC10A6Q3KNW5 377 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 CDCA2Q69YH5 1023 aaPredicted RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 SCYL2Q6P3W7 929 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 DPP9Q86TI2 863 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 ZC3H18Q86VM9 953 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 PHF13Q86YI8 300 aaPredicted RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 TMEM35BQ8NCS4 154 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 KAT2BQ92831 832 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 B3GNT5Q9BYG0 378 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 MIS12Q9H081 205 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 PDZD7Q9H5P4 517 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 SPON1Q9HCB6 807 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 MRPL47Q9HD33 250 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 SAYSD1Q9NPB0 183 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 ERAP1Q9NZ08 941 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 NINJ2Q9NZG7 142 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 DOCK3Q8IZD9 2030 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 BTBD19C9JJ37 291 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 GAS8O95995 478 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 KRT3P12035 628 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 FNTAP49354 379 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 CORO7P57737 925 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 TMED2Q15363 201 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 FAXCQ5TGI0 409 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 TAPT1Q6NXT6 567 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 SPOCD1Q6ZMY3 1216 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 CCDC13Q8IYE1 715 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 C7orf31Q8N865 590 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 TCP11Q8WWU5 503 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 OSMRQ99650 979 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 EIF2AQ9BY44 585 aaKnown RBP9.34□□□□□ -0.91
SNCA-201ENST00000336904 PTPRHQ9HD43 1115 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 CAPN7Q9Y6W3 813 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 CCL15-CCL14A0A0B4J2E2 113 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 MICAL2O94851 1124 aa9.34□□□□□ -0.91
SNCA-201ENST00000336904 PECAM1P16284 738 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms