RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PLCB3Q01970 1234 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 TAP1Q03518 808 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 ADCY1Q08828 1119 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 GPS1Q13098 491 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 TFDP3Q5H9I0 405 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 SRRM1Q8IYB3 904 aaKnown RBP18.7■□□□□ 0.58
LRCH3-201ENST00000334859 WDTC1Q8N5D0 677 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 SPATA33Q96N06 139 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 ELP3Q9H9T3 547 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 SAYSD1Q9NPB0 183 aa18.7■□□□□ 0.58
LRCH3-201ENST00000334859 OTOFQ9HC10 1997 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 CCT8L1PA6NM43 557 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 IRF6O14896 467 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 TCEA3O75764 348 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 EIF4BP23588 611 aaKnown RBP18.69■□□□□ 0.58
LRCH3-201ENST00000334859 ITIH4Q14624 930 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 CELF3Q5SZQ8 465 aaKnown RBP18.69■□□□□ 0.58
LRCH3-201ENST00000334859 DENND1BQ6P3S1 775 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 CEP128Q6ZU80 1094 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 FBXO16Q8IX29 292 aaPredicted RBP18.69■□□□□ 0.58
LRCH3-201ENST00000334859 CYP4X1Q8N118 509 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 ALLCQ8N6M5 410 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 GDAP1Q8TB36 358 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 ZBTB10Q96DT7 871 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 XYLT2Q9H1B5 865 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
LRCH3-201ENST00000334859 hCG_1818297A0A087WSY0 165 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 TCP11X1B4DZS4 312 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 ADM5C9JUS6 153 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 DNALI1O14645 258 aaPredicted RBP18.69■□□□□ 0.58
LRCH3-201ENST00000334859 CXCL8P10145 99 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 STAT4Q14765 748 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 TMED2Q15363 201 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 PPP1R15BQ5SWA1 713 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 WDR78Q5VTH9 848 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 TSHZ1Q6ZSZ6 1077 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 KDM4CQ9H3R0 1056 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 STRIP2Q9ULQ0 834 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 PCDHGC3Q9UN70 934 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 AGTPBP1Q9UPW5 1226 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 NAALADL1Q9UQQ1 740 aa18.69■□□□□ 0.58
LRCH3-201ENST00000334859 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.69■□□□□ 0.58
LRCH3-201ENST00000334859 GH1P01241 217 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 IFNB1P01574 187 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 PSMA2P25787 234 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 CLCN3P51790 818 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 VCPP55072 806 aaKnown RBP18.68■□□□□ 0.58
LRCH3-201ENST00000334859 COPS2P61201 443 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 YWHAEP62258 255 aaKnown RBP18.68■□□□□ 0.58
LRCH3-201ENST00000334859 DYNLT1P63172 113 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 ORC1Q13415 861 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 TFDP1Q14186 410 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 SMTNL2Q2TAL5 461 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 PTPN20Q4JDL3 420 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 LACTB2Q53H82 288 aaPredicted RBP18.68■□□□□ 0.58
LRCH3-201ENST00000334859 HP1BP3Q5SSJ5 553 aaPredicted RBP18.68■□□□□ 0.58
LRCH3-201ENST00000334859 EEF1DP3Q658K8 133 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 RELL1Q8IUW5 271 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 DHX37Q8IY37 1157 aaKnown RBP18.68■□□□□ 0.58
LRCH3-201ENST00000334859 EXOC8Q8IYI6 725 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 ZWILCHQ9H900 591 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 SLC40A1Q9NP59 571 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 FGFR1OP2Q9NVK5 253 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 DDX56Q9NY93 547 aaKnown RBP18.68■□□□□ 0.58
LRCH3-201ENST00000334859 LGALS13Q9UHV8 139 aa18.68■□□□□ 0.58
LRCH3-201ENST00000334859 IGKV6-21A0A0C4DH24 114 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 EXOC1LA0A1B0GW35 172 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 SGK1O00141 431 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 ACKR2O00590 384 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 PECAM1P16284 738 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-201ENST00000334859 CDH5P33151 784 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-201ENST00000334859 CDKN2BP42772 138 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 DRICH1Q6PGQ1 229 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-201ENST00000334859 NLGN2Q8NFZ4 835 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 TMEM121Q9BTD3 319 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 FOXP3Q9BZS1 431 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 SYNCQ9H7C4 482 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 LGR5O75473 907 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 PROZP22891 400 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 RFC1P35251 1148 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-201ENST00000334859 ZKSCAN8Q15776 578 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-201ENST00000334859 ICE2Q659A1 982 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 NUGGCQ68CJ6 796 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 CAPN12Q6ZSI9 719 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 PLPPR4Q7Z2D5 763 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 NIPA2Q8N8Q9 360 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 COPS5Q92905 334 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 CFAP57Q96MR6 1250 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 HAUS2Q9NVX0 235 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 TJP2Q9UDY2 1190 aa18.67■□□□□ 0.58
LRCH3-201ENST00000334859 TPX2Q9ULW0 747 aaKnown RBP18.67■□□□□ 0.58
LRCH3-201ENST00000334859 B4GALT4O60513 344 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 CNMDO75829 334 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 KRT3P12035 628 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 POLR2BP30876 1174 aaKnown RBP18.66■□□□□ 0.58
LRCH3-201ENST00000334859 PSMC4P43686 418 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 MPP2Q14168 576 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 WDR72Q3MJ13 1102 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 ZNF667Q5HYK9 610 aa18.66■□□□□ 0.58
LRCH3-201ENST00000334859 SULF1Q8IWU6 871 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms