RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TJP2Q9UDY2 1190 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 MGAMO43451 1857 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 LRRD1A4D1F6 860 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 C19orf81C9J6K1 198 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 GOLGA8RI6L899 631 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 BPIFB4P59827 614 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 CLDN10P78369 228 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 PDIA2Q13087 525 aaKnown RBP13□□□□□ -0.33
VPS33B-201ENST00000333371 KCNT1Q5JUK3 1230 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 ANKRD22Q5VYY1 191 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 RNF43Q68DV7 783 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 PPP1R21Q6ZMI0 780 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 PHF13Q86YI8 300 aaPredicted RBP13□□□□□ -0.33
VPS33B-201ENST00000333371 GBP7Q8N8V2 638 aaPredicted RBP13□□□□□ -0.33
VPS33B-201ENST00000333371 MCPH1Q8NEM0 835 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 CFAP57Q96MR6 1250 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 MSTO1Q9BUK6 570 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 SLC9A2Q9UBY0 812 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 SUFUQ9UMX1 484 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 NUMBLQ9Y6R0 609 aa13□□□□□ -0.33
VPS33B-201ENST00000333371 SGK1O00141 431 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 UNC5CO95185 931 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 CBX6O95503 412 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 PSAPP07602 524 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 GLRA2P23416 452 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 SSTR1P30872 391 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 GDF10P55107 478 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 MSS51Q4VC12 460 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 SCARA5Q6ZMJ2 495 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 SPOCD1Q6ZMY3 1216 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 ZBTB33Q86T24 672 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 VSIG1Q86XK7 387 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 ALLCQ8N6M5 410 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 ALG13Q9NP73 1137 aaKnown RBP12.99□□□□□ -0.33
VPS33B-201ENST00000333371 PARVAQ9NVD7 372 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 NKX1-2Q9UD57 310 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-201ENST00000333371 TMEM191CA6NGB0 347 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 NCOA4Q13772 614 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 BBOF1Q8ND07 529 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 FBXO41Q8TF61 875 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 MIEF2Q96C03 454 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 C17orf75Q9HAS0 396 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 GPRC5DQ9NZD1 345 aa12.99□□□□□ -0.33
VPS33B-201ENST00000333371 POLR2AP24928 1970 aaKnown RBP12.99□□□□□ -0.33
VPS33B-201ENST00000333371 K7ERI5 159 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 WEE2P0C1S8 567 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 CCNB1P14635 433 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 MMP8P22894 467 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 GPX6P59796 221 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 XRRA1Q6P2D8 792 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 DCUN1D2Q6PH85 259 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 ABHD15Q6UXT9 468 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 RELL1Q8IUW5 271 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 ZWILCHQ9H900 591 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 SCINQ9Y6U3 715 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 CNTNAP2Q9UHC6 1331 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 HIRAP54198 1017 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 OVGP1Q12889 678 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 ORC1Q13415 861 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 MOGSQ13724 837 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 TFDP1Q14186 410 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 SUPT20HL1Q3ZLR7 823 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 RNASEH2BQ5TBB1 312 aaKnown RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 GPRASP2Q96D09 838 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 SMC6Q96SB8 1091 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 NOP53Q9NZM5 478 aaKnown RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 IP6K2Q9UHH9 426 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 ACTL7BQ9Y614 415 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 CLUHO75153 1309 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 TCRBV7S3A2A0A539 114 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 ABHD2P08910 425 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 GM2AP17900 193 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 KRT4P19013 534 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 PAX7P23759 505 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 ADRA1DP25100 572 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 OAZ1P54368 228 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 C1QBPQ07021 282 aaKnown RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 SPARCL1Q14515 664 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 OASLQ15646 514 aaKnown RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 FNBP1LQ5T0N5 605 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 DNAJC24Q6P3W2 148 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 LVRNQ6Q4G3 990 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 WDTC1Q8N5D0 677 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 DEPTORQ8TB45 409 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 NSUN6Q8TEA1 469 aaKnown RBP12.98□□□□□ -0.33
VPS33B-201ENST00000333371 TFAP2BQ92481 460 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 C12orf42Q96LP6 360 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 SGIP1Q9BQI5 828 aa12.98□□□□□ -0.33
VPS33B-201ENST00000333371 WDR83Q9BRX9 315 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms