RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CUL9Q8IWT3 2517 aa15.02□□□□□ -0.01
LIMS1-201ENST00000332345 DOCK6Q96HP0 2047 aa15.02□□□□□ -0.01
LIMS1-201ENST00000332345 CLUHO75153 1309 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 MTMR11A4FU01 709 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 TRIM49BA6NDI0 452 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 TACC1O75410 805 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 VNN1O95497 513 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 FGFR1OPO95684 399 aaKnown RBP15.01□□□□□ -0.01
LIMS1-201ENST00000332345 WARSP23381 471 aaKnown RBP15.01□□□□□ -0.01
LIMS1-201ENST00000332345 SP100P23497 879 aaPredicted RBP15.01□□□□□ -0.01
LIMS1-201ENST00000332345 FSHRP23945 695 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 GNL1P36915 607 aaPredicted RBP15.01□□□□□ -0.01
LIMS1-201ENST00000332345 GCLMP48507 274 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 EPHB3P54753 998 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 PAK1Q13153 545 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 ZNF667Q5HYK9 610 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 C1orf220Q5T0J3 134 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 IQCEQ6IPM2 695 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 LRRTM3Q86VH5 581 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 RNF135Q8IUD6 432 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 ZDHHC14Q8IZN3 488 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 MLKLQ8NB16 471 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 ATAD1Q8NBU5 361 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 CCDC150Q8NCX0 1101 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 FEZF2Q8TBJ5 459 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 SPPL2BQ8TCT7 592 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 IMPG2Q9BZV3 1241 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 TMEM8AQ9HCN3 771 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 ARMCX3Q9UH62 379 aaPredicted RBP15.01□□□□□ -0.01
LIMS1-201ENST00000332345 SLC27A5Q9Y2P5 690 aa15.01□□□□□ -0.01
LIMS1-201ENST00000332345 BDP1A6H8Y1 2624 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 C2CD4DB7Z1M9 353 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 TRIM49P0CI25 452 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 TRIM49CP0CI26 452 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 ALADP13716 330 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 GBP2P32456 591 aaPredicted RBP15□□□□□ -0.01
LIMS1-201ENST00000332345 PIK3CAP42336 1068 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 PPP3CAQ08209 521 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 TWF1Q12792 350 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 MAPRE1Q15691 268 aaKnown RBP15□□□□□ -0.01
LIMS1-201ENST00000332345 PABPC1LQ4VXU2 614 aaKnown RBP15□□□□□ -0.01
LIMS1-201ENST00000332345 TCERG1LQ5VWI1 586 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 KRT39Q6A163 491 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 TTI2Q6NXR4 508 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 FRMD5Q7Z6J6 570 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 OR6B3Q8NGW1 331 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 DUSP9Q99956 384 aaKnown RBP15□□□□□ -0.01
LIMS1-201ENST00000332345 MMRN2Q9H8L6 949 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 DNMT3BQ9UBC3 853 aaKnown RBP15□□□□□ -0.01
LIMS1-201ENST00000332345 CDH9Q9ULB4 789 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 CTNND2Q9UQB3 1225 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 ASB3Q9Y575 518 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 PCDHB5Q9Y5E4 795 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 ZFP37Q9Y6Q3 630 aaPredicted RBP15□□□□□ -0.01
LIMS1-201ENST00000332345 TSC2P49815 1807 aa15□□□□□ -0.01
LIMS1-201ENST00000332345 ZNF197O14709 1029 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 VNN2O95498 520 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 GNA14O95837 355 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 HLA-DRAP01903 254 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 PDGFRBP09619 1106 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 ACAT1P24752 427 aaKnown RBP14.99□□□□□ -0.01
LIMS1-201ENST00000332345 STX17P56962 302 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 MGAT5BQ3V5L5 792 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 CCDC40Q4G0X9 1142 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 INTS6LQ5JSJ4 861 aaKnown RBP14.99□□□□□ -0.01
LIMS1-201ENST00000332345 CYP4A22Q5TCH4 519 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 OSTM1Q86WC4 334 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 KBTBD7Q8WVZ9 684 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 CORO1BQ9BR76 489 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 AVENQ9NQS1 362 aaPredicted RBP14.99□□□□□ -0.01
LIMS1-201ENST00000332345 HCFC1R1Q9NWW0 138 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 ABI2Q9NYB9 513 aaPredicted RBP14.99□□□□□ -0.01
LIMS1-201ENST00000332345 LIMD1Q9UGP4 676 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 RWDD2AQ9UIY3 292 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 GTF3C4Q9UKN8 822 aa14.99□□□□□ -0.01
LIMS1-201ENST00000332345 DENND4AQ7Z401 1863 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 A8MXQ7 604 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 PI4K2BG5E9Z4 385 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 MBD3O95983 291 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 ASS1P00966 412 aaKnown RBP14.98□□□□□ -0.01
LIMS1-201ENST00000332345 RHOP08100 348 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 LMO2P25791 158 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 NTHL1P78549 312 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 DCAF17Q5H9S7 520 aaPredicted RBP14.98□□□□□ -0.01
LIMS1-201ENST00000332345 FAM171BQ6P995 826 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 C4orf50Q6ZRC1 276 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 ITIH5Q86UX2 942 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 LEMD2Q8NC56 503 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 FBXL13Q8NEE6 735 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 GPT2Q8TD30 523 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 TAS1R2Q8TE23 839 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 SEPT5Q99719 369 aaPredicted RBP14.98□□□□□ -0.01
LIMS1-201ENST00000332345 SYT15Q9BQS2 421 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 MRPL45Q9BRJ2 306 aaKnown RBP14.98□□□□□ -0.01
LIMS1-201ENST00000332345 SRRTQ9BXP5 876 aaKnown RBP14.98□□□□□ -0.01
LIMS1-201ENST00000332345 CRISPLD1Q9H336 500 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 ABCB6Q9NP58 842 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 CEP72Q9P209 647 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 DACH1Q9UI36 760 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 MRPS23Q9Y3D9 190 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms