RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 HSFX1Q9UBD0 423 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 GTF3C4Q9UKN8 822 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 TYROBPO43914 113 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 STAMBPO95630 424 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 RPA1P27694 616 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 GEMIN4P57678 1058 aaKnown RBP21.62■■□□□ 1.05
CMTM4-201ENST00000330687 SLFN12Q8IYM2 578 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 ICA1LQ8NDH6 482 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 HAPLN3Q96S86 360 aa21.62■■□□□ 1.05
CMTM4-201ENST00000330687 C15orf38-AP3S2A0A0A6YYH1 394 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 YWHAGP61981 247 aaKnown RBP eCLIP21.61■■□□□ 1.05
CMTM4-201ENST00000330687 TRMT5Q32P41 509 aaKnown RBP21.61■■□□□ 1.05
CMTM4-201ENST00000330687 PARP10Q53GL7 1025 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 DUS1LQ6P1R4 473 aaKnown RBP21.61■■□□□ 1.05
CMTM4-201ENST00000330687 C1orf228Q6PIY5 440 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 CLEC4GQ6UXB4 293 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 ARPINQ7Z6K5 226 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 ZCCHC9Q8N567 271 aaKnown RBP21.61■■□□□ 1.05
CMTM4-201ENST00000330687 SENP1Q9P0U3 644 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 BTBD7Q9P203 1132 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 ZNF510Q9Y2H8 683 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 ADCY3O60266 1144 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 CATSPER2Q96P56 530 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 MRPL1Q9BYD6 325 aaKnown RBP21.61■■□□□ 1.05
CMTM4-201ENST00000330687 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.61■■□□□ 1.05
CMTM4-201ENST00000330687 TCEA3O75764 348 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 CYP11B1P15538 503 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 HIF1AQ16665 826 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 ACAD11Q709F0 780 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 C12orf50Q8NA57 414 aaPredicted RBP21.61■■□□□ 1.05
CMTM4-201ENST00000330687 ANLNQ9NQW6 1124 aa21.61■■□□□ 1.05
CMTM4-201ENST00000330687 C6orf222P0C671 652 aaPredicted RBP21.6■■□□□ 1.05
CMTM4-201ENST00000330687 PMLP29590 882 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 TAS2R40P59535 323 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 QRICH1Q2TAL8 776 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 KLC3Q6P597 504 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 B3GNT6Q6ZMB0 384 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 DHDDSQ86SQ9 333 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 FAM86B1E9PN63 330 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 H0YIN7 160 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 FAM86B2P0C5J1 330 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 PABPC4LP0CB38 370 aaKnown RBP21.6■■□□□ 1.05
CMTM4-201ENST00000330687 MSX2P35548 267 aaPredicted RBP21.6■■□□□ 1.05
CMTM4-201ENST00000330687 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
CMTM4-201ENST00000330687 KLHDC10Q6PID8 442 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 APOL6Q9BWW8 343 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 TOPORSQ9NS56 1045 aaPredicted RBP21.6■■□□□ 1.05
CMTM4-201ENST00000330687 PENKP01210 267 aaPredicted RBP21.6■■□□□ 1.05
CMTM4-201ENST00000330687 HSPA2P54652 639 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 PDE1BQ01064 536 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 NADK2Q4G0N4 442 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 ASPRV1Q53RT3 343 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 SH3D19Q5HYK7 790 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 RSPH3Q86UC2 560 aa21.6■■□□□ 1.05
CMTM4-201ENST00000330687 CYB561D2O14569 222 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 ZBTB5O15062 677 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 PEX1O43933 1283 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 RAG1P15918 1043 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 BASP1P80723 227 aaKnown RBP21.59■■□□□ 1.05
CMTM4-201ENST00000330687 DGCR14Q96DF8 476 aaKnown RBP21.59■■□□□ 1.05
CMTM4-201ENST00000330687 HOMER2Q9NSB8 354 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 INHBAP08476 426 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 UQCRBP14927 111 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 RGS2P41220 211 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 CHN2P52757 468 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 FOLH1Q04609 750 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 TSHZ1Q6ZSZ6 1077 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 DENND5BQ6ZUT9 1274 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 STKLD1Q8NE28 680 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 CYLDQ9NQC7 956 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 MTMR4Q9NYA4 1195 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 IL1RAPL1Q9NZN1 696 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 ADAMTS6Q9UKP5 1117 aa21.59■■□□□ 1.05
CMTM4-201ENST00000330687 XPO1O14980 1071 aaKnown RBP21.58■■□□□ 1.05
CMTM4-201ENST00000330687 ACTR3P61158 418 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 LMBRD2Q68DH5 695 aaPredicted RBP21.58■■□□□ 1.05
CMTM4-201ENST00000330687 STXBP4Q6ZWJ1 553 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 ANKS1BQ7Z6G8 1248 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 SKA1Q96BD8 255 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 KREMEN1Q96MU8 473 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 TSPYL2Q9H2G4 693 aaPredicted RBP21.58■■□□□ 1.05
CMTM4-201ENST00000330687 KCNK13Q9HB14 408 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 ZNF180Q9UJW8 692 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 HOXA7P31268 230 aaPredicted RBP21.58■■□□□ 1.05
CMTM4-201ENST00000330687 PPIDQ08752 370 aaKnown RBP21.58■■□□□ 1.05
CMTM4-201ENST00000330687 HYIQ5T013 277 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 FBXO36Q8NEA4 188 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 UVRAGQ9P2Y5 699 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 PCDHGB4Q9UN71 923 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 PCDHGB5Q9Y5G0 923 aa21.58■■□□□ 1.05
CMTM4-201ENST00000330687 TOM1L1O75674 476 aa21.58■■□□□ 1.04
CMTM4-201ENST00000330687 FAM155BO75949 473 aa21.58■■□□□ 1.04
CMTM4-201ENST00000330687 TM7SF2O76062 418 aa21.58■■□□□ 1.04
CMTM4-201ENST00000330687 KRT1P04264 644 aa21.58■■□□□ 1.04
CMTM4-201ENST00000330687 FDX1P10109 184 aa21.58■■□□□ 1.04
CMTM4-201ENST00000330687 PSMD7P51665 324 aa21.58■■□□□ 1.04
CMTM4-201ENST00000330687 CHI3L2Q15782 390 aa21.58■■□□□ 1.04
CMTM4-201ENST00000330687 PPP6R3Q5H9R7 873 aaPredicted RBP21.58■■□□□ 1.04
CMTM4-201ENST00000330687 PFDN4Q9NQP4 134 aa21.58■■□□□ 1.04
CMTM4-201ENST00000330687 LZTS1Q9Y250 596 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms