RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 HAUS4Q9H6D7 363 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 RPF1Q9H9Y2 349 aaKnown RBP17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 PLEKHA5Q9HAU0 1116 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 CD320Q9NPF0 282 aa17.62■□□□□ 0.41
PDLIM1-201ENST00000329399 CARNS1A5YM72 827 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 PODXLO00592 558 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 EPHB6O15197 1021 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 ADAM12O43184 909 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 NFICP08651 508 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 FERP16591 822 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 PRKCIP41743 596 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 STAT1P42224 750 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 GLUD2P49448 558 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 ETF1P62495 437 aaKnown RBP17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 ASIC2Q16515 512 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 RSPO2Q6UXX9 243 aaPredicted RBP17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 ENOSF1Q7L5Y1 443 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 VPS36Q86VN1 386 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 CEP57Q86XR8 500 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 GLYCTKQ8IVS8 523 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 ADAMTS19Q8TE59 1207 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 RIN2Q8WYP3 895 aaPredicted RBP17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 KIF12Q96FN5 646 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 CDCA3Q99618 268 aaPredicted RBP17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 CHP1Q99653 195 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 FAM213AQ9BRX8 229 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 S1PR5Q9H228 398 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 SIX2Q9NPC8 291 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 MRPL17Q9NRX2 175 aaKnown RBP17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 VWA8A3KMH1 1905 aa17.61■□□□□ 0.41
PDLIM1-201ENST00000329399 ATP8B3O60423 1300 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 MBTPS2O43462 519 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 SPATA31D3P0C874 917 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 TRIM49P0CI25 452 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 TRIM49CP0CI26 452 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 JAM2P57087 298 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 AAK1Q2M2I8 961 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 USP41Q3LFD5 358 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 CBWD6Q4V339 395 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 CBWD3Q5JTY5 395 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 CBWD5Q5RIA9 395 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 SPATA31D4Q6ZUB0 917 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 FBXL13Q8NEE6 735 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 LNX1Q8TBB1 728 aaPredicted RBP17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 JAKMIP2Q96AA8 810 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 C16orf45Q96MC5 204 aaPredicted RBP17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 RXFP1Q9HBX9 757 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 NLRC4Q9NPP4 1024 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 CD207Q9UJ71 328 aa17.6■□□□□ 0.41
PDLIM1-201ENST00000329399 USP27XA6NNY8 438 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 LRRIQ3A6PVS8 624 aaPredicted RBP17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 TMEM189-UBE2V1I3L0A0 370 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 DLL1O00548 723 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 KRT86O43790 486 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 URODP06132 367 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 WEE2P0C1S8 567 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 KLRC2P26717 231 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 TKTP29401 623 aaKnown RBP17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 CLCN4P51793 760 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 PPP3CAQ08209 521 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 ARHGAP29Q52LW3 1261 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 C1orf220Q5T0J3 134 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 ANKRD54Q6NXT1 300 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 EFCAB13Q8IY85 973 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 SMRP1Q8NCR6 262 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 LMO3Q8TAP4 145 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 CLSTN3Q9BQT9 956 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 SLC38A7Q9NVC3 462 aa17.59■□□□□ 0.41
PDLIM1-201ENST00000329399 SF3B1O75533 1304 aaKnown RBP eCLIP17.58■□□□□ 0.411e-8■■■■■ 103.4
PDLIM1-201ENST00000329399 AKR1B10O60218 316 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 KIF5CO60282 957 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 FGFR3P22607 806 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 GCLMP48507 274 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 MFAP3P55082 362 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 KLHL30Q0D2K2 578 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 RAPGEF1Q13905 1077 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 KIAA1841Q6NSI8 718 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 PALB2Q86YC2 1186 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 BRSK2Q8IWQ3 736 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 UROC1Q96N76 676 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 TTPALQ9BTX7 342 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 RBAKQ9NYW8 714 aaPredicted RBP17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 ARHGAP20Q9P2F6 1191 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 DNAJC12Q9UKB3 198 aa17.58■□□□□ 0.41
PDLIM1-201ENST00000329399 PDCD11Q14690 1871 aaKnown RBP17.58■□□□□ 0.4
PDLIM1-201ENST00000329399 ANK1P16157 1881 aa17.58■□□□□ 0.4
PDLIM1-201ENST00000329399 SPTLC1O15269 473 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 IL18RAPO95256 599 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 LRPAP1P30533 357 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 RPL9P32969 192 aaKnown RBP17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 DLG4P78352 724 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 TUBB2AQ13885 445 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 MTF1Q14872 753 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 ASTE1Q2TB18 679 aaPredicted RBP17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 HGSNATQ68CP4 663 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 C15orf39Q6ZRI6 1047 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 DDX27Q96GQ7 796 aaKnown RBP17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 CGRRF1Q99675 332 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 TUBB2BQ9BVA1 445 aa17.57■□□□□ 0.4
PDLIM1-201ENST00000329399 RAB20Q9NX57 234 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms