RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TMEM109Q9BVC6 243 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 NRBP2Q9NSY0 501 aa16.43■□□□□ 0.22
SHROOM1-201ENST00000319854 CHRNA3P32297 505 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 NAMPTP43490 491 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 CLCN3P51790 818 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 DRG2P55039 364 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 RPL7AP62424 266 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 CWF19L1Q69YN2 538 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 GBP7Q8N8V2 638 aaPredicted RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 VTI1AQ96AJ9 217 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 DIS3Q9Y2L1 958 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 LUC7L3O95232 432 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 NEFHP12036 1026 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 ARMC3Q5W041 872 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 ZNF408Q9H9D4 720 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 UVRAGQ9P2Y5 699 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 H0Y3Z8 333 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 UNC5CO95185 931 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 RALAP11233 206 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 UNGP13051 313 aaPredicted RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 GTF2H1P32780 548 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 ARL2P36404 184 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 TAS2R40P59535 323 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 KRT17Q04695 432 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 DHX34Q14147 1143 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 HP1BP3Q5SSJ5 553 aaPredicted RBP16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 TAOK1Q7L7X3 1001 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 GPC2Q8N158 579 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 CHST13Q8NET6 341 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 CKAP2Q8WWK9 683 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 IMPG2Q9BZV3 1241 aa16.42■□□□□ 0.22
SHROOM1-201ENST00000319854 LOXHD1Q8IVV2 1947 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 A0A0B4J269 797 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 A0A1B0GVG6 124 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 KRT10P13645 584 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 ATF7P17544 494 aaPredicted RBP16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 CYP4A22Q5TCH4 519 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 SPATA33Q96N06 139 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 RNPEPL1Q9HAU8 725 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 RNF181Q9P0P0 153 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 GINS2Q9Y248 185 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 ECEL1O95672 775 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 TPBGLP0DKB5 382 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 CD19P15391 556 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 CALB2P22676 271 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 PCK1P35558 622 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 RAP1GAPP47736 663 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 MXRA7P84157 204 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 CYP4X1Q8N118 509 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 TEKT4Q8WW24 435 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 SEPT1Q8WYJ6 367 aa16.41■□□□□ 0.22
SHROOM1-201ENST00000319854 ATP2A1O14983 1001 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 RARGP13631 454 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 LAMTOR4Q0VGL1 99 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 MTM1Q13496 603 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 PPP1R15BQ5SWA1 713 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 TMEM192Q8IY95 271 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 PHC3Q8NDX5 983 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 DNERQ8NFT8 737 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 TTC8Q8TAM2 541 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 TGS1Q96RS0 853 aaKnown RBP16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 MYLK2Q9H1R3 596 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 GOLGA8SH3BPF8 625 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 ADCY3O60266 1144 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 ACO1P21399 889 aaKnown RBP16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 CTNNA2P26232 953 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 TARSP26639 723 aaKnown RBP16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 HADHBP55084 474 aaKnown RBP16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 CALCOCO2Q13137 446 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 FAM47EQ6ZV65 393 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 HAO1Q9UJM8 370 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 DOCK1Q14185 1865 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 RLFQ13129 1914 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 H0YCG3 227 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 PIK3R2O00459 728 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 TRPC3Q13507 836 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 RNF220Q5VTB9 566 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 CAPN12Q6ZSI9 719 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 ANKS1BQ7Z6G8 1248 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 TEX9Q8N6V9 391 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 FAM13CQ8NE31 585 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 CDC42EP4Q9H3Q1 356 aaKnown RBP16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 AAASQ9NRG9 546 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 C2CD2Q9Y426 696 aa16.4■□□□□ 0.22
SHROOM1-201ENST00000319854 WDR81Q562E7 1941 aa16.39■□□□□ 0.22
SHROOM1-201ENST00000319854 PMM2O15305 246 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 PRKCBP05771 671 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 CYP2C8P10632 490 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 FOXN2P32314 431 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 ADCY8P40145 1251 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 CDH8P55286 799 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 RTP1P59025 263 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 SIX1Q15475 284 aaPredicted RBP16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 FAM160B1Q5W0V3 765 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 SLFN12LQ6IEE8 588 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms