RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 HAPLN1P10915 354 aaPredicted RBP15.37■□□□□ 0.05
RPP40-201ENST00000319533 PDCP20941 246 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 NMT1P30419 496 aaKnown RBP15.37■□□□□ 0.05
RPP40-201ENST00000319533 ACOT2P49753 483 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 TAF6P49848 677 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 GRIN1Q05586 938 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 DHX8Q14562 1220 aaKnown RBP15.37■□□□□ 0.05
RPP40-201ENST00000319533 VEPH1Q14D04 833 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 CSRP2Q16527 193 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 LPAL2Q16609 132 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 SLC39A12Q504Y0 691 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 CRELD2Q6UXH1 353 aaPredicted RBP15.37■□□□□ 0.05
RPP40-201ENST00000319533 LRRTM3Q86VH5 581 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 GPIHBP1Q8IV16 184 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 SPPL2BQ8TCT7 592 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 NETO1Q8TDF5 533 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 ZFYVE19Q96K21 471 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 SLC46A2Q9BY10 475 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 C2orf42Q9NWW7 574 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 DPP3Q9NY33 737 aa15.37■□□□□ 0.05
RPP40-201ENST00000319533 SOBPA7XYQ1 873 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 TISP43B9A030 160 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 CYB561D2O14569 222 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 TBCAO75347 108 aaKnown RBP15.36■□□□□ 0.05
RPP40-201ENST00000319533 PPP1R37O75864 691 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 DDIT3P35638 169 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 CYP4F8P98187 520 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 TNK2Q07912 1038 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 KARSQ15046 597 aaKnown RBP15.36■□□□□ 0.05
RPP40-201ENST00000319533 PON2Q15165 354 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 ITPRIPL2Q3MIP1 535 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 MGAT5BQ3V5L5 792 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 ZC2HC1CQ53FD0 456 aaPredicted RBP15.36■□□□□ 0.05
RPP40-201ENST00000319533 ADALQ6DHV7 355 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 PRR23BQ6ZRT6 265 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 ZNF720Q7Z2F6 126 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 TMEM150AQ86TG1 271 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 WDR5BQ86VZ2 330 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 METTL23Q86XA0 190 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 NT5DC4Q86YG4 428 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 THEM5Q8N1Q8 247 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 LARP4BQ92615 738 aaKnown RBP15.36■□□□□ 0.05
RPP40-201ENST00000319533 HVCN1Q96D96 273 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 SEPT5Q99719 369 aaPredicted RBP15.36■□□□□ 0.05
RPP40-201ENST00000319533 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 STRA6Q9BX79 667 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 SEMA4GQ9NTN9 838 aa15.36■□□□□ 0.05
RPP40-201ENST00000319533 THG1LQ9NWX6 298 aaKnown RBP15.36■□□□□ 0.05
RPP40-201ENST00000319533 AGO2Q9UKV8 859 aaKnown RBP15.36■□□□□ 0.05
RPP40-201ENST00000319533 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.36■□□□□ 0.05
RPP40-201ENST00000319533 KMT2BQ9UMN6 2715 aaPredicted RBP15.35■□□□□ 0.05
RPP40-201ENST00000319533 DCDC2BA2VCK2 349 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 FOXD2O60548 495 aaPredicted RBP15.35■□□□□ 0.05
RPP40-201ENST00000319533 F11P03951 625 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 KRT18P05783 430 aaKnown RBP15.35■□□□□ 0.05
RPP40-201ENST00000319533 HMGA1P17096 107 aaKnown RBP15.35■□□□□ 0.05
RPP40-201ENST00000319533 DDX6P26196 483 aaKnown RBP eCLIP15.35■□□□□ 0.053e-7■■■■■ 42.6
RPP40-201ENST00000319533 ADSSP30520 456 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 SRSF5Q13243 272 aaKnown RBP15.35■□□□□ 0.05
RPP40-201ENST00000319533 PTPAQ15257 358 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 WSCD1Q658N2 575 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 BRAPQ7Z569 592 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 EFCAB13Q8IY85 973 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 CMTM8Q8IZV2 173 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 TTC8Q8TAM2 541 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 FAM200AQ8TCP9 573 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 CNTNAP3BQ96NU0 1288 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 GCNAQ96QF7 691 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 PYM1Q9BRP8 204 aaKnown RBP15.35■□□□□ 0.05
RPP40-201ENST00000319533 CNTNAP3Q9BZ76 1288 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
RPP40-201ENST00000319533 CACNA1BQ00975 2339 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 DENND4CQ5VZ89 1909 aa15.35■□□□□ 0.05
RPP40-201ENST00000319533 CCDC163A0A0D9SF12 145 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 VPS37CA5D8V6 355 aaPredicted RBP15.34■□□□□ 0.05
RPP40-201ENST00000319533 KPNA7A9QM74 516 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 K7ELQ4 463 aaPredicted RBP15.34■□□□□ 0.05
RPP40-201ENST00000319533 IL18RAPO95256 599 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 NLRP12P59046 1061 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 POSTNQ15063 836 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 SV2CQ496J9 727 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 TMEM196Q5HYL7 178 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 PRR23CQ6ZRP0 262 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 DCP1BQ8IZD4 617 aaKnown RBP15.34■□□□□ 0.05
RPP40-201ENST00000319533 GIPC2Q8TF65 315 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 CHFRQ96EP1 664 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 INTS4Q96HW7 963 aaKnown RBP15.34■□□□□ 0.05
RPP40-201ENST00000319533 ZHX3Q9H4I2 956 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 GKN1Q9NS71 199 aa15.34■□□□□ 0.05
RPP40-201ENST00000319533 TRDMT1O14717 391 aaKnown RBP15.33■□□□□ 0.04
RPP40-201ENST00000319533 ADRB1P08588 477 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 HOXC13P31276 330 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 PNPLA4P41247 253 aa15.33■□□□□ 0.04
RPP40-201ENST00000319533 SF3A1Q15459 793 aaKnown RBP15.33■□□□□ 0.04
RPP40-201ENST00000319533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.33■□□□□ 0.04
RPP40-201ENST00000319533 FAM160A2Q8N612 972 aaPredicted RBP15.33■□□□□ 0.04
RPP40-201ENST00000319533 KRI1Q8N9T8 703 aaKnown RBP15.33■□□□□ 0.04
RPP40-201ENST00000319533 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
RPP40-201ENST00000319533 USP13Q92995 863 aaPredicted RBP15.33■□□□□ 0.04
RPP40-201ENST00000319533 LOXL4Q96JB6 756 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms