RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 RNASELQ05823 741 aaKnown RBP20.13■□□□□ 0.81
RTN4-201ENST00000317610 KCNN1Q92952 543 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 SLC38A10Q9HBR0 1119 aa20.13■□□□□ 0.81
RTN4-201ENST00000317610 KRT4P19013 534 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 ATP6V1C1P21283 382 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 TBXAS1P24557 533 aaPredicted RBP20.12■□□□□ 0.81
RTN4-201ENST00000317610 HMGB2P26583 209 aaKnown RBP20.12■□□□□ 0.81
RTN4-201ENST00000317610 MAPK6Q16659 721 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 SPDYE2Q495Y8 402 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 FYB2Q5VWT5 728 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 CLNKQ7Z7G1 428 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 CDAN1Q8IWY9 1227 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 SLC35B2Q8TB61 432 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 MZB1Q8WU39 189 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 DENND2DQ9H6A0 471 aaPredicted RBP20.12■□□□□ 0.81
RTN4-201ENST00000317610 RAVER2Q9HCJ3 691 aaKnown RBP20.12■□□□□ 0.81
RTN4-201ENST00000317610 ZFATQ9P243 1243 aa20.12■□□□□ 0.81
RTN4-201ENST00000317610 PPP1R12AO14974 1030 aaPredicted RBP20.11■□□□□ 0.81
RTN4-201ENST00000317610 WDR46O15213 610 aaKnown RBP20.11■□□□□ 0.81
RTN4-201ENST00000317610 LMNAP02545 664 aaKnown RBP20.11■□□□□ 0.81
RTN4-201ENST00000317610 LIG4P49917 911 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 CCNHP51946 323 aaPredicted RBP20.11■□□□□ 0.81
RTN4-201ENST00000317610 ZNF132P52740 706 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 NLRP11P59045 1033 aaKnown RBP20.11■□□□□ 0.81
RTN4-201ENST00000317610 PLEKHG4Q58EX7 1191 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 TFDP3Q5H9I0 405 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 ADGRD1Q6QNK2 874 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 PCGF5Q86SE9 256 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 CPXCR1Q8N123 301 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 RMDN3Q96TC7 470 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 KANSL3Q9P2N6 904 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 ANKFY1Q9P2R3 1169 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 GABBR1Q9UBS5 961 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 SIP14410 1827 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 ABLIM1O14639 778 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 ASNSP08243 561 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 MARK3P27448 753 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 SSTR3P32745 418 aaPredicted RBP20.11■□□□□ 0.81
RTN4-201ENST00000317610 CDKN2BP42772 138 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 HIF1AQ16665 826 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 FKBP1CQ5VVH2 108 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 CAPN12Q6ZSI9 719 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 ATP6V0A1Q93050 837 aa20.11■□□□□ 0.81
RTN4-201ENST00000317610 MYH9P35579 1960 aaKnown RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 TM9SF1O15321 606 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 DKC1O60832 514 aaKnown RBP eCLIP20.1■□□□□ 0.81
RTN4-201ENST00000317610 GLRA2P23416 452 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 NOP14P78316 857 aaKnown RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 ANO7Q6IWH7 933 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 UBR7Q8N806 425 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 FAM167BQ9BTA0 163 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 OSBPL1AQ9BXW6 950 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 SLC24A3Q9HC58 644 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 NPHS2Q9NP85 383 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 HOMER2Q9NSB8 354 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 DDX56Q9NY93 547 aaKnown RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 AGO2Q9UKV8 859 aaKnown RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 SNCAIPQ9Y6H5 919 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 NUMBLQ9Y6R0 609 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 ZNF541Q9H0D2 1346 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 TESPA1A2RU30 521 aaPredicted RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 CALB1P05937 261 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 TROVE2P10155 538 aaKnown RBP eCLIP20.1■□□□□ 0.81
RTN4-201ENST00000317610 ACADSP16219 412 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 ADRA1DP25100 572 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 PHBP35232 272 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 GCKP35557 465 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 XRRA1Q6P2D8 792 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 MTDHQ86UE4 582 aaKnown RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 ATP11CQ8NB49 1132 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 ARMC2Q8NEN0 867 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 TTC8Q8TAM2 541 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 ALKBH8Q96BT7 664 aaKnown RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 MIPEPQ99797 713 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 TMEM121Q9BTD3 319 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 ZNF341Q9BYN7 854 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 POLR3FQ9H1D9 316 aaPredicted RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 VPS11Q9H270 941 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 DCLRE1BQ9H816 532 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 ZNF219Q9P2Y4 722 aaPredicted RBP20.1■□□□□ 0.81
RTN4-201ENST00000317610 NUB1Q9Y5A7 615 aa20.1■□□□□ 0.81
RTN4-201ENST00000317610 H0YIN7 160 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 LINGO3P0C6S8 592 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 OGDHQ02218 1023 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 MAP3K10Q02779 954 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 DLGAP5Q15398 846 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 NIPA2Q8N8Q9 360 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 ZNF606Q8WXB4 792 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 LPAR1Q92633 364 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 GPRASP2Q96D09 838 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 TMEM39BQ9GZU3 492 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 ACSS3Q9H6R3 686 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 E7ESA3 106 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 F8VP50 259 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 SGK1O00141 431 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 PIGRP01833 764 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 PTDSS1P48651 473 aaKnown RBP20.09■□□□□ 0.81
RTN4-201ENST00000317610 ACOT2P49753 483 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 KLHL38Q2WGJ6 581 aa20.09■□□□□ 0.81
RTN4-201ENST00000317610 PPP1R15BQ5SWA1 713 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms