RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FDX1P10109 184 aa5.02□□□□□ -1.61
PTPN13-201ENST00000316707 TTBK2Q6IQ55 1244 aa5.02□□□□□ -1.61
PTPN13-201ENST00000316707 C3orf67Q6ZVT6 689 aa5.02□□□□□ -1.61
PTPN13-201ENST00000316707 OTOP1Q7RTM1 612 aa5.02□□□□□ -1.61
PTPN13-201ENST00000316707 SPATA24Q86W54 205 aa5.02□□□□□ -1.61
PTPN13-201ENST00000316707 DYDC2Q96IM9 177 aa5.02□□□□□ -1.61
PTPN13-201ENST00000316707 NLRP4Q96MN2 994 aa5.02□□□□□ -1.61
PTPN13-201ENST00000316707 HEMGNQ9BXL5 484 aa5.02□□□□□ -1.61
PTPN13-201ENST00000316707 AP1G1O43747 822 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 LPXNO60711 386 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 RPS6KA4O75676 772 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ITGAVP06756 1048 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 UBTFL6P0CB48 400 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SLC16A2P36021 539 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 MAP3K10Q02779 954 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 HELQQ8TDG4 1101 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF518BQ9C0D4 1074 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 NRDE2Q9H7Z3 1164 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PIDD1Q9HB75 910 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PCMTD2Q9NV79 361 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 E7ESA3 106 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 NPM3O75607 178 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 BAG2O95816 211 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 KRT1P04264 644 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 CYP1A1P04798 512 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SNRPAP09012 282 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 POLR2MP0CAP2 368 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 POLR2BP30876 1174 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SLC18A2Q05940 514 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PRKD1Q15139 912 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ANKRD20A4Q4UJ75 823 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 UBAP2Q5T6F2 1119 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 C1orf228Q6PIY5 440 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 TMEM179Q6ZVK1 233 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PHF13Q86YI8 300 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 OR6Y1Q8NGX8 325 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SPIRE2Q8WWL2 714 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 E2F7Q96AV8 911 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SENP7Q9BQF6 1050 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 DHRS4Q9BTZ2 278 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 MAK16Q9BXY0 300 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SLC7A8Q9UHI5 535 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 EIF4E1BA6NMX2 242 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 BIRC5O15392 142 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 TMPRSS15P98073 1019 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 WASHC5Q12768 1159 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 WDR72Q3MJ13 1102 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PPP1R14CQ8TAE6 165 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SPOCK2Q92563 424 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 LRRC39Q96DD0 335 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 HAUS8Q9BT25 410 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 KLHL4Q9C0H6 718 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 METTL5Q9NRN9 209 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 TBCCD1Q9NVR7 557 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 MRPL11Q9Y3B7 192 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ZSCAN9O15535 394 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SERPINA6P08185 405 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 KRT7P08729 469 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 DLDP09622 509 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ZCCHC18P0CG32 403 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 MYL2P10916 166 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SERPINB9P50453 376 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 CHN2P52757 468 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 HADHQ16836 314 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 RABGAP1LQ5R372 815 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 HHIPL2Q6UWX4 724 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 BBS12Q6ZW61 710 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 MYLK4Q86YV6 388 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ULK2Q8IYT8 1036 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 GMCL1P1Q8NEA9 526 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SLC35B2Q8TB61 432 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 TRPC4APQ8TEL6 797 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 NAT14Q8WUY8 206 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 KREMEN1Q96MU8 473 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PRM3Q9NNZ6 103 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PARVAQ9NVD7 372 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PAIP2BQ9ULR5 123 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 JAG2Q9Y219 1238 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 AFDNP55196 1824 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ARHGAP42A6NI28 874 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SFI1A8K8P3 1242 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 H3BRJ5 948 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ATMINO43313 823 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 UFL1O94874 794 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 UNGP13051 313 aaPredicted RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ADSSP30520 456 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ETV4P43268 484 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PSMD7P51665 324 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 NR1H2P55055 460 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 EIF6P56537 245 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 TMED1Q13445 227 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 ITPK1Q13572 414 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 KRT81Q14533 505 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 SNRNP35Q16560 246 aaKnown RBP5.01□□□□□ -1.61
PTPN13-201ENST00000316707 BBS9Q3SYG4 887 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 PLEKHG4Q58EX7 1191 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 B3GNT6Q6ZMB0 384 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 MIER3Q7Z3K6 550 aa5.01□□□□□ -1.61
PTPN13-201ENST00000316707 TRIM74Q86UV6 250 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms