RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 RNF169Q8NCN4 708 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 C1orf131Q8NDD1 294 aaKnown RBP16.72■□□□□ 0.27
CALR-201ENST00000316448 ACTRT1Q8TDG2 376 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 TSPAN18Q96SJ8 248 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 C11orf70Q9BRQ4 267 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 NUP85Q9BW27 656 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 TRIM7Q9C029 511 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 TMEM59LQ9UK28 342 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 GIT1Q9Y2X7 761 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 SASH3O75995 380 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 PAEPP09466 180 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 P4HA1P13674 534 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 SMYD5Q6GMV2 418 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 MMS22LQ6ZRQ5 1243 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 ZNF598Q86UK7 904 aaKnown RBP16.72■□□□□ 0.27
CALR-201ENST00000316448 PHF13Q86YI8 300 aaPredicted RBP16.72■□□□□ 0.27
CALR-201ENST00000316448 PAAF1Q9BRP4 392 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 FUT8Q9BYC5 575 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 AMFRQ9UKV5 643 aa16.72■□□□□ 0.27
CALR-201ENST00000316448 KPNA7A9QM74 516 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 NBNO60934 754 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 GJB6O95452 261 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 CDH5P33151 784 aaPredicted RBP16.71■□□□□ 0.27
CALR-201ENST00000316448 NSFP46459 744 aaKnown RBP16.71■□□□□ 0.27
CALR-201ENST00000316448 LILRA4P59901 499 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 TCTN1Q2MV58 587 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 CCDC70Q6NSX1 233 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 LIMS2Q7Z4I7 341 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 RASGEF1CQ8N431 466 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 C12orf29Q8N999 325 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 KBTBD7Q8WVZ9 684 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 HEXIM2Q96MH2 286 aaKnown RBP16.71■□□□□ 0.27
CALR-201ENST00000316448 TJP2Q9UDY2 1190 aa16.71■□□□□ 0.27
CALR-201ENST00000316448 SPDYE4A6NLX3 237 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 DDX3YO15523 660 aaKnown RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 C1QTNF8P60827 252 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 LRRC8DQ7L1W4 858 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 ZNF564Q8TBZ8 553 aaPredicted RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 LRRC1Q9BTT6 524 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 TSPYL2Q9H2G4 693 aaPredicted RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 RGS18Q9NS28 235 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 GDAP2Q9NXN4 497 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 ADAM22Q9P0K1 906 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 L1RE1Q9UN81 338 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 ALG6Q9Y672 507 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 TMEM110-MUSTN1A8MSY1 372 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 C9IYK1 514 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 PGRMC1O00264 195 aaKnown RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 XPOTO43592 962 aaKnown RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 MICAL2O94851 1124 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 THP07101 528 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 SELPP16109 830 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 MMP8P22894 467 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 LMO2P25791 158 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 TAF6P49848 677 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 GLE1Q53GS7 698 aaKnown RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 OSTM1Q86WC4 334 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 C3orf58Q8NDZ4 430 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 CRISPLD2Q9H0B8 497 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 DPEP3Q9H4B8 488 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 AVENQ9NQS1 362 aaPredicted RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 UVRAGQ9P2Y5 699 aa16.7■□□□□ 0.26
CALR-201ENST00000316448 TTC7AQ9ULT0 858 aaPredicted RBP16.7■□□□□ 0.26
CALR-201ENST00000316448 O00370 1275 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 MAP2K7O14733 419 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 POMCP01189 267 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 VDRP11473 427 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 RAB27AP51159 221 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 CLCNKBP51801 687 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 MESDQ14696 234 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 DCAF12L1Q5VU92 463 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 ACOT1Q86TX2 421 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 HACE1Q8IYU2 909 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 KRT222Q8N1A0 295 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 UBE2Q2Q8WVN8 375 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.69■□□□□ 0.263e-22■■■□□ 17.1
CALR-201ENST00000316448 SELENOOQ9BVL4 669 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 NT5C1AQ9BXI3 368 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 CARD9Q9H257 536 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
CALR-201ENST00000316448 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.69■□□□□ 0.26
CALR-201ENST00000316448 TCRBV5S1A1TA0A578 114 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 CASTOR2A6NHX0 329 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 PQBP1O60828 265 aaKnown RBP16.68■□□□□ 0.26
CALR-201ENST00000316448 PFKMP08237 780 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 FAM189BP81408 668 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 CNGA2Q16280 664 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 C8orf74Q6P047 294 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 CD300LGQ6UXG3 332 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 DPH6Q7L8W6 267 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 TMEM35BQ8NCS4 154 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 UBA3Q8TBC4 463 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 DIS3LQ8TF46 1054 aaKnown RBP16.68■□□□□ 0.26
CALR-201ENST00000316448 HDAC7Q8WUI4 952 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 RPS6KC1Q96S38 1066 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 LHX5Q9H2C1 402 aa16.68■□□□□ 0.26
CALR-201ENST00000316448 DMGDHQ9UI17 866 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms