RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 USTQ9Y2C2 406 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 NEU2Q9Y3R4 380 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 SIP14410 1827 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 VIMP08670 466 aaKnown RBP15.76■□□□□ 0.11
CHFR-202ENST00000315585 HUNKP57058 714 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 CNGA2Q16280 664 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 IZUMO3Q5VZ72 239 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 CDCA2Q69YH5 1023 aaPredicted RBP15.76■□□□□ 0.11
CHFR-202ENST00000315585 PIGWQ7Z7B1 504 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 EXOC3L1Q86VI1 746 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 CCDC13Q8IYE1 715 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 UHMK1Q8TAS1 419 aaKnown RBP15.76■□□□□ 0.11
CHFR-202ENST00000315585 PRMT1Q99873 361 aaKnown RBP15.76■□□□□ 0.11
CHFR-202ENST00000315585 HAPLN2Q9GZV7 340 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 ABHD16BQ9H3Z7 469 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 EFR3BQ9Y2G0 817 aa15.76■□□□□ 0.11
CHFR-202ENST00000315585 PTPRJQ12913 1337 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 MAGEB2O15479 319 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 TNNC2P02585 160 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 GSTA1P08263 222 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 LAMTOR4Q0VGL1 99 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 PPP1R21Q6ZMI0 780 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 PCGF5Q86SE9 256 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 TRIM50Q86XT4 487 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 ZCCHC9Q8N567 271 aaKnown RBP15.75■□□□□ 0.11
CHFR-202ENST00000315585 NIPA2Q8N8Q9 360 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 GBP7Q8N8V2 638 aaPredicted RBP15.75■□□□□ 0.11
CHFR-202ENST00000315585 OR5B17Q8NGF7 314 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 LGALS13Q9UHV8 139 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 COL1A2P08123 1366 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 CCT8L1PA6NM43 557 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 TP73O15350 636 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 CDH5P33151 784 aaPredicted RBP15.75■□□□□ 0.11
CHFR-202ENST00000315585 IRF5Q13568 498 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 LONRF1Q17RB8 773 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 ANKRD20A8PQ5CZ79 823 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 POLNQ7Z5Q5 900 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 ERICH1Q86X53 443 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 UBR7Q8N806 425 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 TTC13Q8NBP0 860 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 ELMO3Q96BJ8 720 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 ANKRD36BP1Q96IX9 119 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 MAML3Q96JK9 1138 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 NKIRAS1Q9NYS0 192 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 ZNF148Q9UQR1 794 aa15.75■□□□□ 0.11
CHFR-202ENST00000315585 MCM3APO60318 1980 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 MSCO60682 206 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 HNRNPH1P31943 449 aaKnown RBP15.74■□□□□ 0.11
CHFR-202ENST00000315585 WNT7BP56706 349 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 TAS2R40P59535 323 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 KYNUQ16719 465 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 TFDP3Q5H9I0 405 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 ICE2Q659A1 982 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 IQSEC1Q6DN90 963 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 HIBCHQ6NVY1 386 aaPredicted RBP15.74■□□□□ 0.11
CHFR-202ENST00000315585 PHLDB2Q86SQ0 1253 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 CCT6BQ92526 530 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 ACO2Q99798 780 aaKnown RBP15.74■□□□□ 0.11
CHFR-202ENST00000315585 PTPN18Q99952 460 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 UBN1Q9NPG3 1134 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 WDR35Q9P2L0 1181 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 ZBTB42B2RXF5 422 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 CALCAP01258 141 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 KRT1P04264 644 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 LGALS2P05162 132 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 PRKCBP05771 671 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 HARSP12081 509 aaKnown RBP15.74■□□□□ 0.11
CHFR-202ENST00000315585 LLGL1Q15334 1064 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 HADHQ16836 314 aaKnown RBP15.74■□□□□ 0.11
CHFR-202ENST00000315585 KCTD19Q17RG1 926 aaPredicted RBP15.74■□□□□ 0.11
CHFR-202ENST00000315585 RNF149Q8NC42 400 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 SLITRK1Q96PX8 696 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 TINF2Q9BSI4 451 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 DDX23Q9BUQ8 820 aaKnown RBP15.74■□□□□ 0.11
CHFR-202ENST00000315585 LRRC4CQ9HCJ2 640 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 CISHQ9NSE2 258 aa15.74■□□□□ 0.11
CHFR-202ENST00000315585 R3HDM2Q9Y2K5 976 aaKnown RBP15.74■□□□□ 0.11
CHFR-202ENST00000315585 DCAF8L1A6NGE4 600 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 LIASO43766 372 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 IL18RAPO95256 599 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 SNAI1O95863 264 aaPredicted RBP15.73■□□□□ 0.11
CHFR-202ENST00000315585 KRT7P08729 469 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 SRGAP2CP0DJJ0 459 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 CD58P19256 250 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 KLRC2P26717 231 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 CHKAP35790 457 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 POU5F1BQ06416 359 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 MORF4L2Q15014 288 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 TRIP13Q15645 432 aaPredicted RBP15.73■□□□□ 0.11
CHFR-202ENST00000315585 CST9Q5W186 159 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 EFCAB12Q6NXP0 572 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 OSBPL7Q9BZF2 842 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 LHX5Q9H2C1 402 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 NINJ2Q9NZG7 142 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 SENP1Q9P0U3 644 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 CPSF3Q9UKF6 684 aaKnown RBP15.73■□□□□ 0.11
CHFR-202ENST00000315585 TMEM120BA0PK00 339 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 SMAPO00193 183 aa15.73■□□□□ 0.11
CHFR-202ENST00000315585 B4GALT4O60513 344 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms