RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 LPIN1Q14693 890 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 SOWAHAQ2M3V2 549 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 LLGL2Q6P1M3 1020 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 SLC43A3Q8NBI5 491 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 PPP1R10Q96QC0 940 aaKnown RBP17.74■□□□□ 0.43
CLCF1-201ENST00000312438 MRPL45Q9BRJ2 306 aaKnown RBP17.74■□□□□ 0.43
CLCF1-201ENST00000312438 LRRC1Q9BTT6 524 aa17.74■□□□□ 0.43
CLCF1-201ENST00000312438 CCDC188H7C350 402 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 O00370 1275 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 ERLIN1O75477 346 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 MICAL2O94851 1124 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 PROSCO94903 275 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 RAB27AP51159 221 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 SV2CQ496J9 727 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 DCAF12L1Q5VU92 463 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 LCLAT1Q6UWP7 414 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 KRT35Q92764 455 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 RNPC3Q96LT9 517 aaKnown RBP17.73■□□□□ 0.43
CLCF1-201ENST00000312438 STARD7Q9NQZ5 370 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
CLCF1-201ENST00000312438 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 PTCH2Q9Y6C5 1203 aa17.73■□□□□ 0.43
CLCF1-201ENST00000312438 A0A1W2PQ45 241 aaPredicted RBP17.72■□□□□ 0.43
CLCF1-201ENST00000312438 A0A1W2PQY0 241 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 TCRBV5S1A1TA0A578 114 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 TMEM191CA6NGB0 347 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 KRIT1O00522 736 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 FGGP02679 453 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 GPD2P43304 727 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 RWDD2BP57060 319 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 VSNL1P62760 191 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 DSC3Q14574 896 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 ZNF618Q5T7W0 954 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 DPH6Q7L8W6 267 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 OR6B3Q8NGW1 331 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.72■□□□□ 0.43
CLCF1-201ENST00000312438 RUBCNQ92622 972 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 C18orf8Q96DM3 657 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 ZFP42Q96MM3 310 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 OSBPL7Q9BZF2 842 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 TRIM7Q9C029 511 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 DNAI2Q9GZS0 605 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 ARFGAP3Q9NP61 516 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 WDR35Q9P2L0 1181 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 IP6K2Q9UHH9 426 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 A0A0U1RQF3 1178 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 A0A0U1RQG5 324 aaPredicted RBP17.72■□□□□ 0.43
CLCF1-201ENST00000312438 THP07101 528 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 FAM163BP0C2L3 166 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 SKIP12755 728 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 LILRA4P59901 499 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 LONRF2Q1L5Z9 754 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 C8orf74Q6P047 294 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 CC2D1AQ6P1N0 951 aaPredicted RBP17.72■□□□□ 0.43
CLCF1-201ENST00000312438 DNAJC24Q6P3W2 148 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 C3orf20Q8ND61 904 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 GSTCDQ8NEC7 633 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 GAD1Q99259 594 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 PLVAPQ9BX97 442 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 SEZ6LQ9BYH1 1024 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 PHF24Q9UPV7 400 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLCF1-201ENST00000312438 THSD7BQ9C0I4 1608 aa17.72■□□□□ 0.43
CLCF1-201ENST00000312438 MEIS3P2A8K0S8 358 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 M0QYV0 167 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 SPTLC1O15269 473 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 CKBP12277 381 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 MAN1A1P33908 653 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 GNL1P36915 607 aaPredicted RBP17.71■□□□□ 0.43
CLCF1-201ENST00000312438 MLH1P40692 756 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 ZNF211Q13398 564 aaPredicted RBP17.71■□□□□ 0.43
CLCF1-201ENST00000312438 ZNF268Q14587 947 aaPredicted RBP17.71■□□□□ 0.43
CLCF1-201ENST00000312438 PTPN20Q4JDL3 420 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 DCUN1D2Q6PH85 259 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 AGMOQ6ZNB7 445 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 LIMS2Q7Z4I7 341 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 APPL2Q8NEU8 664 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 KRT12Q99456 494 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 AP1M1Q9BXS5 423 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 TRPV6Q9H1D0 765 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 TSPYL2Q9H2G4 693 aaPredicted RBP17.71■□□□□ 0.43
CLCF1-201ENST00000312438 CYTH4Q9UIA0 394 aa17.71■□□□□ 0.43
CLCF1-201ENST00000312438 A8MXQ7 604 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 KBTBD13C9JR72 458 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 ARVCFO00192 962 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 HUS1O60921 280 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 MARCKSL1P49006 195 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 GSCP56915 257 aaPredicted RBP17.7■□□□□ 0.42
CLCF1-201ENST00000312438 PPP1R15BQ5SWA1 713 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 SEL1L2Q5TEA6 688 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 ACOT1Q86TX2 421 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 CPNE8Q86YQ8 564 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 CRYBG2Q8N1P7 616 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 TOP6BLQ8N6T0 577 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 PGBD4Q96DM1 585 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 ADAM2Q99965 735 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 MIS12Q9H081 205 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■■■■ 39.7
CLCF1-201ENST00000312438 SNX25Q9H3E2 840 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms