RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 KCNT2Q6UVM3 1135 aa16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 ACOT1Q86TX2 421 aa16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 COLGALT1Q8NBJ5 622 aa16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 ACRBPQ8NEB7 543 aa16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 EIF3CQ99613 913 aaKnown RBP16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 DNAI2Q9GZS0 605 aa16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 DPEP3Q9H4B8 488 aa16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 DDX43Q9NXZ2 648 aaKnown RBP16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 ADAMTS1Q9UHI8 967 aa16.45■□□□□ 0.22
PIKFYVE-202ENST00000308862 DDX3XO00571 662 aaKnown RBP eCLIP16.44■□□□□ 0.222e-10■■■■■ 37.8
PIKFYVE-202ENST00000308862 TLL1O43897 1013 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 PDGFRBP09619 1106 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 TNFAIP3P21580 790 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 LMO2P25791 158 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 TKTP29401 623 aaKnown RBP16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 ELAVL2Q12926 359 aaKnown RBP16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 OVOS1Q6IE37 1185 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 FIBCD1Q8N539 461 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 TFAP2BQ92481 460 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 TNIP3Q96KP6 325 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 HEXIM2Q96MH2 286 aaKnown RBP16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 RAD9AQ99638 391 aa16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.44■□□□□ 0.22
PIKFYVE-202ENST00000308862 VWA8A3KMH1 1905 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 CARNS1A5YM72 827 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 SYN3O14994 580 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 MED7O43513 233 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 LCA5LO95447 670 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 VDRP11473 427 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 ACAT1P24752 427 aaKnown RBP16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 PSMC1P62191 440 aaKnown RBP16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 YWHAHQ04917 246 aaPredicted RBP16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 SPA17Q15506 151 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 SGO2Q562F6 1265 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 FAM171A1Q5VUB5 890 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 PALB2Q86YC2 1186 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 SP7Q8TDD2 431 aaPredicted RBP16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 ZNF606Q8WXB4 792 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 IGSF21Q96ID5 467 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 ZSWIM1Q9BR11 485 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 GPR62Q9BZJ7 368 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 PDCL3Q9H2J4 239 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 ADGRG1Q9Y653 693 aa16.43■□□□□ 0.22
PIKFYVE-202ENST00000308862 ZNF263O14978 683 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 CCDC175P0C221 793 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 PCSK1P29120 753 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 SSTR3P32745 418 aaPredicted RBP16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 CYP27A1Q02318 531 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 SHHQ15465 462 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 PASD1Q8IV76 773 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 B3GALNT2Q8NCR0 500 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 SLC30A5Q8TAD4 765 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 RTP3Q9BQQ7 232 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 SYT15Q9BQS2 421 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 AAASQ9NRG9 546 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 FAM49BQ9NUQ9 324 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 NAGPAQ9UK23 515 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 KIAA1257Q9ULG3 409 aa16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 REXO2Q9Y3B8 237 aaKnown RBP16.42■□□□□ 0.22
PIKFYVE-202ENST00000308862 O00370 1275 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 CFHP08603 1231 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 FGFR3P22607 806 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 KRT83P78385 493 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 TRIM72Q6ZMU5 477 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 ZSCAN30Q86W11 494 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 CEP57Q86XR8 500 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 CRYBG2Q8N1P7 616 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 C12orf29Q8N999 325 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 KIAA1524Q8TCG1 905 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 TMEM169Q96HH4 297 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 PCDHB18PQ96TA0 734 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 UBE2OQ9C0C9 1292 aaKnown RBP16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 SPG21Q9NZD8 308 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 CDH9Q9ULB4 789 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 NENFQ9UMX5 172 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 PCDHGC3Q9UN70 934 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 PPP2R2CQ9Y2T4 447 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 NLRC5Q86WI3 1866 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 GBF1Q92538 1859 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 LCHNA4D1U4 455 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 ATP2C2O75185 946 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 LINC00271P0C7V0 271 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 PPM1AP35813 382 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 CLEC16AQ2KHT3 1053 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 VARS2Q5ST30 1063 aaKnown RBP16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 CCDC122Q5T0U0 273 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 KIAA0319Q5VV43 1072 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 THEM5Q8N1Q8 247 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 OR10T2Q8NGX3 314 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 B3GALT6Q96L58 329 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 LPIN3Q9BQK8 851 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 VN1R3Q9BXE9 311 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 LUC7LQ9NQ29 371 aaKnown RBP16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 PCDHB12Q9Y5F1 795 aa16.41■□□□□ 0.22
PIKFYVE-202ENST00000308862 FAM170AA1A519 330 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms