RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TRPV4Q9HBA0 871 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 IL21Q9HBE4 155 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 KIAA1586Q9HCI6 787 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 DMAC2Q9NW81 257 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 USP25Q9UHP3 1055 aa21.33■■□□□ 1.01
PDZRN3-202ENST00000308537 MIA3Q5JRA6 1907 aa21.33■■□□□ 1
PDZRN3-202ENST00000308537 ZFHX2Q9C0A1 2572 aaPredicted RBP21.32■■□□□ 1
PDZRN3-202ENST00000308537 GREB1Q4ZG55 1949 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 A0A1W2PQ27 194 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 A0A1W2PQ64 194 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 A0A1W2PQD8 194 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 TMEM191BP0C7N4 346 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 MYL4P12829 197 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 CYP2J2P51589 502 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 STARD6P59095 220 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 BFSP1Q12934 665 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 PLD1Q13393 1074 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 SURF1Q15526 300 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 STXBP5Q5T5C0 1151 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 CYP4A22Q5TCH4 519 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 METTL23Q86XA0 190 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 XXYLT1Q8NBI6 393 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 RDH13Q8NBN7 331 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 KBTBD7Q8WVZ9 684 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 GDPD2Q9HCC8 539 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 ASB3Q9Y575 518 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 NME7Q9Y5B8 376 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 SNX9Q9Y5X1 595 aa21.32■■□□□ 1
PDZRN3-202ENST00000308537 KIF26AQ9ULI4 1882 aaPredicted RBP21.32■■□□□ 1
PDZRN3-202ENST00000308537 RIF1Q5UIP0 2472 aaKnown RBP21.32■■□□□ 1
PDZRN3-202ENST00000308537 TICRRQ7Z2Z1 1910 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 A0A1W2PRU2 124 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 CST3P01034 146 aaPredicted RBP21.31■■□□□ 1
PDZRN3-202ENST00000308537 HAPLN1P10915 354 aaPredicted RBP21.31■■□□□ 1
PDZRN3-202ENST00000308537 GLULP15104 373 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 EPHB3P54753 998 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 DUOXA2Q1HG44 320 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 TRAPPC11Q7Z392 1133 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 CCDC105Q8IYK2 499 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 THEM5Q8N1Q8 247 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 TMEM86AQ8N2M4 240 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 TOP6BLQ8N6T0 577 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 SPATA18Q8TC71 538 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 SPPL2BQ8TCT7 592 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 C2orf15Q8WU43 125 aaKnown RBP21.31■■□□□ 1
PDZRN3-202ENST00000308537 SMARCD2Q92925 531 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 ANKRD36BP1Q96IX9 119 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 CGRRF1Q99675 332 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 ACBD6Q9BR61 282 aa21.31■■□□□ 1
PDZRN3-202ENST00000308537 SCAND2PQ9GZW5 306 aaPredicted RBP21.31■■□□□ 1
PDZRN3-202ENST00000308537 DDX43Q9NXZ2 648 aaKnown RBP21.31■■□□□ 1
PDZRN3-202ENST00000308537 CGNQ9P2M7 1197 aaKnown RBP21.31■■□□□ 1
PDZRN3-202ENST00000308537 MYL1P05976 194 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 KRT19P08727 400 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 HMGA1P17096 107 aaKnown RBP21.3■■□□□ 1
PDZRN3-202ENST00000308537 ACAT1P24752 427 aaKnown RBP21.3■■□□□ 1
PDZRN3-202ENST00000308537 SYKP43405 635 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 ALDH1A3P47895 512 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 SMARCB1Q12824 385 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 DPYDQ12882 1025 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 INTS6LQ5JSJ4 861 aaKnown RBP21.3■■□□□ 1
PDZRN3-202ENST00000308537 VITQ6UXI7 678 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 HS2ST1Q7LGA3 356 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 TMEM150AQ86TG1 271 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 HPDLQ96IR7 371 aa21.3■■□□□ 1
PDZRN3-202ENST00000308537 H0Y858 1186 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 ARNTLO00327 626 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 HUS1O60921 280 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 VIPR2P41587 438 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 TUFMP49411 452 aaKnown RBP21.29■■□□□ 1
PDZRN3-202ENST00000308537 CLDN10P78369 228 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 PSMD2Q13200 908 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 SNW1Q13573 536 aaKnown RBP21.29■■□□□ 1
PDZRN3-202ENST00000308537 SLC44A4Q53GD3 710 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 KRBA2Q6ZNG9 492 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 DPH6Q7L8W6 267 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 SLC9A9Q8IVB4 645 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 ADGRF2Q8IZF7 708 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 FSIP1Q8NA03 581 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 ZSCAN18Q8TBC5 510 aaPredicted RBP21.29■■□□□ 1
PDZRN3-202ENST00000308537 LRRC3BQ96PB8 259 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 SEPT5Q99719 369 aaPredicted RBP21.29■■□□□ 1
PDZRN3-202ENST00000308537 FOXQ1Q9C009 403 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 XYLT2Q9H1B5 865 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 ZFP14Q9HCL3 533 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 FAM86C1Q9NVL1 165 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 ANAPC1Q9H1A4 1944 aa21.29■■□□□ 1
PDZRN3-202ENST00000308537 PATJQ8NI35 1801 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 LRRN2O75325 713 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 RHOBTB3O94955 611 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 TNNC2P02585 160 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 RPN1P04843 607 aaKnown RBP21.28■■□□□ 1
PDZRN3-202ENST00000308537 DLATP10515 647 aaKnown RBP21.28■■□□□ 1
PDZRN3-202ENST00000308537 LMO2P25791 158 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 CASP4P49662 377 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 GPR15P49685 360 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 GRM2Q14416 872 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 MLF2Q15773 248 aaPredicted RBP21.28■■□□□ 1
PDZRN3-202ENST00000308537 MGAT5BQ3V5L5 792 aa21.28■■□□□ 1
PDZRN3-202ENST00000308537 FAM171BQ6P995 826 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms