RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ZSCAN5CA6NGD5 496 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 USP17L5A8MUK1 530 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 CHMP2AO43633 222 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 PTGES3Q15185 160 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 KRT31Q15323 416 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TRIM65Q6PJ69 517 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 C16orf86Q6ZW13 317 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 PEX13Q92968 403 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 PPP1R36Q96LQ0 422 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 Q96MT0 163 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RACGAP1Q9H0H5 632 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RANBP17Q9H2T7 1088 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 LMCD1Q9NZU5 365 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SELENONQ9NZV5 590 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ZMYND8Q9ULU4 1186 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 APOL1O14791 398 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 PMM2O15305 246 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 FGGP02679 453 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 COPAP53621 1224 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TMEM44Q2T9K0 475 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 FNIP1Q8TF40 1166 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ATXN2LQ8WWM7 1075 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 L3MBTL3Q96JM7 780 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 MROH8Q9H579 483 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ANKHQ9HCJ1 492 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TRPM5Q9NZQ8 1165 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ADAM22Q9P0K1 906 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 MAN1B1Q9UKM7 699 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 WDR91A4D1P6 747 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 CYP1A2P05177 515 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 GLI1P08151 1106 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SNRPAP09012 282 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 HADHBP55084 474 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 ANKS3Q6ZW76 656 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SRLQ86TD4 932 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 CEP295NLQ96MC4 621 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 COL3A1P02461 1466 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 TTLL8A6PVC2 850 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 USP17L10C9JJH3 530 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 MPZL2O60487 215 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TMEM253P0C7T8 217 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 CPA3P15088 417 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 LHX1P48742 406 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RPL19P84098 196 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 MAPK7Q13164 816 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RBM20Q5T481 1227 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 NR1H4Q96RI1 486 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 ADGRE3Q9BY15 652 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SMIM23A6NLE4 172 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 THRAP10827 490 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 CD19P15391 556 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 HARS2P49590 506 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 CCNHP51946 323 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 TMPRSS15P98073 1019 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 PTPN12Q05209 780 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 DPYDQ12882 1025 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 PPIL6Q8IXY8 311 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SLF1Q9BQI6 1058 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 SYTL2Q9HCH5 934 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 AVENQ9NQS1 362 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 KCNQ5Q9NR82 932 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RAB21Q9UL25 225 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RIMBP3CA6NJZ7 1639 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RIMBP3BA6NNM3 1639 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RIMBP3Q9UFD9 1639 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 GLRA3O75311 464 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 HMGCRP04035 888 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RAD23AP54725 363 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ZCCHC8Q6NZY4 707 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 APPL2Q8NEU8 664 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ZNF564Q8TBZ8 553 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 RIBC2Q9H4K1 309 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 EFCAB1Q9HAE3 211 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 C6orf203Q9P0P8 240 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 ANAPC7Q9UJX3 599 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ALDH1A1P00352 501 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 XPAP23025 273 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 SERPINH1P50454 418 aaKnown RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 ZNF248Q8NDW4 579 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 C1QTNF7Q9BXJ2 289 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 RMND5AQ9H871 391 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 VPS51Q9UID3 782 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ZNF711Q9Y462 761 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ASTN2O75129 1339 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 MST1RQ04912 1400 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TESPA1A2RU30 521 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 PPEF1O14829 653 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 CYTH3O43739 400 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 LSP1P33241 339 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 HDAC11Q96DB2 347 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ZIM3Q96PE6 472 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TUBB1Q9H4B7 451 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 UBAP1Q9NZ09 502 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 POLG2Q9UHN1 485 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 PKD1L3Q7Z443 1732 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 ITGAVP06756 1048 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 GPTP24298 496 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 TCHHL1Q5QJ38 904 aaPredicted RBP4.19□□□□□ -1.74
USH2A-201ENST00000307340 DPH6Q7L8W6 267 aa4.19□□□□□ -1.74
USH2A-201ENST00000307340 USP6NLQ92738 828 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms