RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
SMIM4-201ENST00000307106 TBX20Q9UMR3 447 aa12.89□□□□□ -0.35
SMIM4-201ENST00000307106 CCL26Q9Y258 94 aa12.89□□□□□ -0.35
SMIM4-201ENST00000307106 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 AVPR1AP37288 418 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 NR5A1Q13285 461 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 ANO7Q6IWH7 933 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
SMIM4-201ENST00000307106 RAB44Q7Z6P3 723 aaPredicted RBP12.88□□□□□ -0.35
SMIM4-201ENST00000307106 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 CD101Q93033 1021 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 ZNF274Q96GC6 653 aaPredicted RBP12.88□□□□□ -0.35
SMIM4-201ENST00000307106 CNOT6LQ96LI5 555 aaKnown RBP12.88□□□□□ -0.35
SMIM4-201ENST00000307106 MTMR9Q96QG7 549 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
SMIM4-201ENST00000307106 TCHPQ9BT92 498 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 ZMYM5Q9UJ78 669 aa12.88□□□□□ -0.35
SMIM4-201ENST00000307106 APC2O95996 2303 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 UPK3BL1B0FP48 263 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 UPK3BL2E5RIL1 263 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 LARGE1O95461 756 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 MCF2P10911 925 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
SMIM4-201ENST00000307106 ATF6P18850 670 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 FAM193AP78312 1265 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 PDGFRLQ15198 375 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 ZNF423Q2M1K9 1284 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 OVOS1Q6IE37 1185 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 TMEM130Q8N3G9 435 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 HDDC3Q8N4P3 179 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 MAB21L3Q8N8X9 362 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 MDGA1Q8NFP4 955 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 RIN3Q8TB24 985 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 KIFAP3Q92845 792 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 USP13Q92995 863 aaPredicted RBP12.87□□□□□ -0.35
SMIM4-201ENST00000307106 SEPT5Q99719 369 aaPredicted RBP12.87□□□□□ -0.35
SMIM4-201ENST00000307106 TARS2Q9BW92 718 aaKnown RBP12.87□□□□□ -0.35
SMIM4-201ENST00000307106 MRPL4Q9BYD3 311 aaKnown RBP12.87□□□□□ -0.35
SMIM4-201ENST00000307106 KIF9Q9HAQ2 790 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 TMEM74BQ9NUR3 256 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 TDP1Q9NUW8 608 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 HSFX1Q9UBD0 423 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 URB1O60287 2271 aaKnown RBP12.87□□□□□ -0.35
SMIM4-201ENST00000307106 STK36Q9NRP7 1315 aa12.87□□□□□ -0.35
SMIM4-201ENST00000307106 CCDC169A6NNP5 214 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 WNT7AO00755 349 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 ABLIM1O14639 778 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 TNFRSF10BO14763 440 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 CDC45O75419 566 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 CDKL5O76039 1030 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 PROZP22891 400 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 KRT2P35908 639 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 TUFMP49411 452 aaKnown RBP12.86□□□□□ -0.35
SMIM4-201ENST00000307106 AARSP49588 968 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMIM4-201ENST00000307106 ATXN3P54252 364 aaPredicted RBP12.86□□□□□ -0.35
SMIM4-201ENST00000307106 TAF12Q16514 161 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 SLC10A6Q3KNW5 377 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 MGAT5BQ3V5L5 792 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 SLC23A3Q6PIS1 610 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 MPZL3Q6UWV2 235 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 LPCAT2Q7L5N7 544 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 TTC30AQ86WT1 665 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 SYT12Q8IV01 421 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 HNRNPLLQ8WVV9 542 aaKnown RBP12.86□□□□□ -0.35
SMIM4-201ENST00000307106 TNFRSF25Q93038 417 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 CCDC86Q9H6F5 360 aaKnown RBP12.86□□□□□ -0.35
SMIM4-201ENST00000307106 ECT2Q9H8V3 914 aa12.86□□□□□ -0.35
SMIM4-201ENST00000307106 MBD1Q9UIS9 605 aaPredicted RBP12.86□□□□□ -0.35
SMIM4-201ENST00000307106 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
SMIM4-201ENST00000307106 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 TYMPP19971 482 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 DDX6P26196 483 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMIM4-201ENST00000307106 RPA1P27694 616 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 NMT1P30419 496 aaKnown RBP12.85□□□□□ -0.35
SMIM4-201ENST00000307106 LRPAP1P30533 357 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 PTGER3P43115 390 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 PEX3P56589 373 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 SPAG1Q07617 926 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 SEZ6Q53EL9 994 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 TMEFF1Q8IYR6 380 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 CCDC26Q8TAB7 109 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 ADAM32Q8TC27 787 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 LRIG1Q96JA1 1093 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 GTPBP2Q9BX10 602 aaKnown RBP12.85□□□□□ -0.35
SMIM4-201ENST00000307106 TMEM134Q9H6X4 195 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
SMIM4-201ENST00000307106 ASXL3Q9C0F0 2248 aa12.85□□□□□ -0.35
SMIM4-201ENST00000307106 MAP3K13O43283 966 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 OPHN1O60890 802 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 DTNBO60941 627 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 CFIP05156 583 aa12.84□□□□□ -0.35
SMIM4-201ENST00000307106 DPP6P42658 865 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms