RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 OR4Q2P0C623 313 aa26.14■■□□□ 1.77
HOXC9-201ENST00000303450 CLCN4P51793 760 aa26.14■■□□□ 1.77
HOXC9-201ENST00000303450 YWHAEP62258 255 aaKnown RBP26.14■■□□□ 1.77
HOXC9-201ENST00000303450 CCDC85BQ15834 202 aaPredicted RBP26.14■■□□□ 1.77
HOXC9-201ENST00000303450 DCP1BQ8IZD4 617 aaKnown RBP26.14■■□□□ 1.77
HOXC9-201ENST00000303450 FAM81BQ96LP2 452 aa26.14■■□□□ 1.77
HOXC9-201ENST00000303450 PCMTD1Q96MG8 357 aaPredicted RBP26.14■■□□□ 1.77
HOXC9-201ENST00000303450 NAP1L5Q96NT1 182 aaPredicted RBP26.14■■□□□ 1.77
HOXC9-201ENST00000303450 LSM14BQ9BX40 385 aaKnown RBP26.14■■□□□ 1.77
HOXC9-201ENST00000303450 ZCWPW1Q9H0M4 648 aa26.14■■□□□ 1.77
HOXC9-201ENST00000303450 FAM124BQ9H5Z6 455 aaPredicted RBP26.14■■□□□ 1.77
HOXC9-201ENST00000303450 CISHQ9NSE2 258 aa26.14■■□□□ 1.77
HOXC9-201ENST00000303450 CDH9Q9ULB4 789 aa26.14■■□□□ 1.77
HOXC9-201ENST00000303450 BARX2Q9UMQ3 279 aaPredicted RBP26.14■■□□□ 1.77
HOXC9-201ENST00000303450 TGM5O43548 720 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 NDST1P52848 882 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 UBASH3AP57075 661 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 APBA1Q02410 837 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 INCA1Q0VD86 236 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 SYCP1Q15431 976 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 INTS6LQ5JSJ4 861 aaKnown RBP26.13■■□□□ 1.77
HOXC9-201ENST00000303450 LLGL2Q6P1M3 1020 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 UNC93AQ86WB7 457 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 ZNF461Q8TAF7 563 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 PPM1EQ8WY54 764 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 SYT15Q9BQS2 421 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 NME7Q9Y5B8 376 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 HCFC2Q9Y5Z7 792 aa26.13■■□□□ 1.77
HOXC9-201ENST00000303450 WDR27A2RRH5 827 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 TEX33O43247 280 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 NCK2O43639 380 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 GPR17Q13304 367 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 SLC39A12Q504Y0 691 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 EFHBQ8N7U6 833 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 KAT5Q92993 513 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 ERGIC2Q96RQ1 377 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 SIX2Q9NPC8 291 aa26.12■■□□□ 1.77
HOXC9-201ENST00000303450 CILPO75339 1184 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 C1RP00736 705 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 SPATA31D3P0C874 917 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 TRIM21P19474 475 aaKnown RBP26.11■■□□□ 1.77
HOXC9-201ENST00000303450 MFAP3P55082 362 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 PSMC1P62191 440 aaKnown RBP26.11■■□□□ 1.77
HOXC9-201ENST00000303450 TPGS2Q68CL5 300 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 GJB7Q6PEY0 223 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 SPATA31D4Q6ZUB0 917 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 ENOSF1Q7L5Y1 443 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 LRRTM3Q86VH5 581 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 SLC22A17Q8WUG5 538 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 TNIP3Q96KP6 325 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 DNAI2Q9GZS0 605 aa26.11■■□□□ 1.77
HOXC9-201ENST00000303450 ATP2C2O75185 946 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 ABLIM3O94929 683 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 EPCAMP16422 314 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 KLK7P49862 253 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 NR1I3Q14994 352 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 KLHDC7AQ5VTJ3 777 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 LILRA6Q6PI73 481 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 RNF19BQ6ZMZ0 732 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 KREMEN1Q96MU8 473 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 PGLYRP2Q96PD5 576 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 NT5C1AQ9BXI3 368 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 DPEP3Q9H4B8 488 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 PLCB1Q9NQ66 1216 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 IFNKQ9P0W0 207 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 HMGXB4Q9UGU5 601 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 AFF4Q9UHB7 1163 aaKnown RBP26.1■■□□□ 1.77
HOXC9-201ENST00000303450 GTF3C4Q9UKN8 822 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 SIK3Q9Y2K2 1263 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 PLXNA3P51805 1871 aa26.1■■□□□ 1.77
HOXC9-201ENST00000303450 SRGAP2BP0DMP2 458 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 PTPN1P18031 435 aaKnown RBP26.09■■□□□ 1.77
HOXC9-201ENST00000303450 ADCY1Q08828 1119 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 SMARCB1Q12824 385 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 ORC1Q13415 861 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 SKIV2LQ15477 1246 aaKnown RBP26.09■■□□□ 1.77
HOXC9-201ENST00000303450 ZNF394Q53GI3 561 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 ACOT1Q86TX2 421 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 B3GALNT2Q8NCR0 500 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 JAKMIP2Q96AA8 810 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 CRTAC1Q9NQ79 661 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 FAM207AQ9NSI2 230 aaPredicted RBP26.09■■□□□ 1.77
HOXC9-201ENST00000303450 DPP7Q9UHL4 492 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 DNAJC12Q9UKB3 198 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 PCDHB4Q9Y5E5 795 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 MYBPHLA2RUH7 354 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 LINC01565O15544 149 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 TPM3P06753 285 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 ATF2P15336 505 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 ELF1P32519 619 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 RBM10P98175 930 aaKnown RBP26.09■■□□□ 1.77
HOXC9-201ENST00000303450 PLCB2Q00722 1185 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 MAPRE1Q15691 268 aaKnown RBP26.09■■□□□ 1.77
HOXC9-201ENST00000303450 NFE2Q16621 373 aaPredicted RBP26.09■■□□□ 1.77
HOXC9-201ENST00000303450 ARHGAP44Q17R89 818 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 DPY19L2P1Q6NXN4 242 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 ELMSAN1Q6PJG2 1045 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 EP400NLQ6ZTU2 488 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 KREMEN2Q8NCW0 462 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 CASP10Q92851 521 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms