RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 PRPF4O43172 522 aaKnown RBP eCLIP25.4■■□□□ 1.666e-7■■□□□ 12.2
FOXA3-201ENST00000302177 GAS2O43903 313 aaKnown RBP25.4■■□□□ 1.66
FOXA3-201ENST00000302177 TGFB3P10600 412 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 SSTR3P32745 418 aaPredicted RBP25.4■■□□□ 1.66
FOXA3-201ENST00000302177 ALDH5A1P51649 535 aaPredicted RBP25.4■■□□□ 1.66
FOXA3-201ENST00000302177 MTFR1Q15390 333 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 KAZNQ674X7 775 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 SEPT14Q6ZU15 432 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 TRABD2AQ86V40 505 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 FAM228AQ86W67 206 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 FAM167AQ96KS9 214 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 MCEEQ96PE7 176 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 RXFP1Q9HBX9 757 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 PCDH9Q9HC56 1237 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 AFG3L2Q9Y4W6 797 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 CEP83Q9Y592 693 aa25.4■■□□□ 1.66
FOXA3-201ENST00000302177 EXOC1LA0A1B0GW35 172 aa25.39■■□□□ 1.66
FOXA3-201ENST00000302177 F8VP50 259 aa25.39■■□□□ 1.66
FOXA3-201ENST00000302177 UBOX5O94941 541 aa25.39■■□□□ 1.66
FOXA3-201ENST00000302177 ATF7P17544 494 aaPredicted RBP25.39■■□□□ 1.66
FOXA3-201ENST00000302177 UBA1P22314 1058 aaKnown RBP25.39■■□□□ 1.66
FOXA3-201ENST00000302177 CDKN2BP42772 138 aa25.39■■□□□ 1.66
FOXA3-201ENST00000302177 YWHAEP62258 255 aaKnown RBP25.39■■□□□ 1.66
FOXA3-201ENST00000302177 FAM133BQ5BKY9 247 aaKnown RBP25.39■■□□□ 1.66
FOXA3-201ENST00000302177 ZFYVE27Q5T4F4 411 aa25.39■■□□□ 1.66
FOXA3-201ENST00000302177 CDCA2Q69YH5 1023 aaPredicted RBP25.39■■□□□ 1.66
FOXA3-201ENST00000302177 ERICH1Q86X53 443 aa25.39■■□□□ 1.66
FOXA3-201ENST00000302177 TCP11Q8WWU5 503 aa25.39■■□□□ 1.66
FOXA3-201ENST00000302177 LCTP09848 1927 aa25.39■■□□□ 1.65
FOXA3-201ENST00000302177 GH1P01241 217 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 EDNRBP24530 442 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 MYL6P60660 151 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 CCDC15Q0P6D6 951 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 ZNF268Q14587 947 aaPredicted RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 RNASEH2BQ5TBB1 312 aaKnown RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 CYP4F22Q6NT55 531 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 RGS9BPQ6ZS82 235 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 GDAP1Q8TB36 358 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 PRPF31Q8WWY3 499 aaKnown RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 ACO2Q99798 780 aaKnown RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 KLHL14Q9P2G3 628 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 FETUBQ9UGM5 382 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 SLC24A2Q9UI40 661 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 CPSF3Q9UKF6 684 aaKnown RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 SMG5Q9UPR3 1016 aaKnown RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 LTBP3Q9NS15 1303 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 SSC5DA1L4H1 1573 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 TCF4P15884 667 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 PECAM1P16284 738 aaPredicted RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 TAC1P20366 129 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 GCAP28676 217 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 POLR2BP30876 1174 aaKnown RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 GPS1Q13098 491 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 MXD4Q14582 209 aaPredicted RBP25.38■■□□□ 1.65
FOXA3-201ENST00000302177 GPAT2Q6NUI2 795 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 CENPUQ71F23 418 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 WDTC1Q8N5D0 677 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 TTC13Q8NBP0 860 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 SLC35B2Q8TB61 432 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 SEPT1Q8WYJ6 367 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 FAXDC2Q96IV6 333 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 TCHPQ9BT92 498 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 LHX5Q9H2C1 402 aa25.38■■□□□ 1.65
FOXA3-201ENST00000302177 A0A1B0GUA9 196 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 ATP6V1G2O95670 118 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 TNFSF9P41273 254 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 OGDHQ02218 1023 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 CNTN2Q02246 1040 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 TRPC3Q13507 836 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 GLIS1Q8NBF1 620 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 DENND1AQ8TEH3 1009 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 FNIP1Q8TF40 1166 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 SBF1O95248 1867 aa25.37■■□□□ 1.65
FOXA3-201ENST00000302177 ASMTLO95671 621 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 BRD2P25440 801 aaKnown RBP25.36■■□□□ 1.65
FOXA3-201ENST00000302177 SKIV2L2P42285 1042 aaKnown RBP25.36■■□□□ 1.65
FOXA3-201ENST00000302177 NCALDP61601 193 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 TMED2Q15363 201 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 SEZ6Q53EL9 994 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 PRUNE1Q86TP1 453 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 MTMR12Q9C0I1 747 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 C2orf40Q9H1Z8 148 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 KLHL11Q9NVR0 708 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 AGAP1Q9UPQ3 857 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 STARD13Q9Y3M8 1113 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 PPP2R3BQ9Y5P8 575 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 FOXO6A8MYZ6 492 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 FZD9O00144 591 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 HARSP12081 509 aaKnown RBP25.36■■□□□ 1.65
FOXA3-201ENST00000302177 NQO1P15559 274 aaKnown RBP25.36■■□□□ 1.65
FOXA3-201ENST00000302177 WDR72Q3MJ13 1102 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 ZBTB8OSQ8IWT0 167 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 MLXIPLQ9NP71 852 aa25.36■■□□□ 1.65
FOXA3-201ENST00000302177 SIGLEC16A6NMB1 481 aa25.35■■□□□ 1.65
FOXA3-201ENST00000302177 SMAPO00193 183 aa25.35■■□□□ 1.65
FOXA3-201ENST00000302177 ABLIM1O14639 778 aa25.35■■□□□ 1.65
FOXA3-201ENST00000302177 KRT7P08729 469 aa25.35■■□□□ 1.65
FOXA3-201ENST00000302177 FSTL1Q12841 308 aa25.35■■□□□ 1.65
FOXA3-201ENST00000302177 ZC3H12AQ5D1E8 599 aaKnown RBP25.35■■□□□ 1.65
FOXA3-201ENST00000302177 LBX2Q6XYB7 198 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms