RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GSPT2Q8IYD1 628 aaKnown RBP23.63■■□□□ 1.37
SMAD1-201ENST00000302085 RAET1EQ8TD07 263 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 NAP1L3Q99457 506 aaPredicted RBP23.63■■□□□ 1.37
SMAD1-201ENST00000302085 NT5C1AQ9BXI3 368 aa23.63■■□□□ 1.37
SMAD1-201ENST00000302085 HEXIM1O94992 359 aaKnown RBP23.62■■□□□ 1.37
SMAD1-201ENST00000302085 MAP2K2P36507 400 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 THPOP40225 353 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 CLUL1Q15846 466 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 SGO2Q562F6 1265 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 PPP1R15BQ5SWA1 713 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 DAB2IPQ5VWQ8 1189 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 AGO3Q9H9G7 860 aaKnown RBP23.62■■□□□ 1.37
SMAD1-201ENST00000302085 GDF3Q9NR23 364 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 CHST12Q9NRB3 414 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 TJP2Q9UDY2 1190 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 KIAA1257Q9ULG3 409 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 NME7Q9Y5B8 376 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 THSD7BQ9C0I4 1608 aa23.62■■□□□ 1.37
SMAD1-201ENST00000302085 MAP2K7O14733 419 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 CYP3A5P20815 502 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 VEGFBP49765 207 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 DNAJC24Q6P3W2 148 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 PXYLP1Q8TE99 480 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 ZSCAN5CA6NGD5 496 aaPredicted RBP23.61■■□□□ 1.37
SMAD1-201ENST00000302085 SPTLC1O15269 473 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 ATF7P17544 494 aaPredicted RBP23.61■■□□□ 1.37
SMAD1-201ENST00000302085 GUCY2DQ02846 1103 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 ITGA7Q13683 1181 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 SOWAHAQ2M3V2 549 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 SEL1L2Q5TEA6 688 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 HDXQ7Z353 690 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 RNF180Q86T96 592 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 ZDHHC14Q8IZN3 488 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 CPXM1Q96SM3 734 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 GOLGA2P5Q9HBQ8 144 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 EPB41L5Q9HCM4 733 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 ERVK-5Q9HDB9 667 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 IP6K2Q9UHH9 426 aa23.61■■□□□ 1.37
SMAD1-201ENST00000302085 MEIS3P2A8K0S8 358 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 PTGESO14684 152 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 XPOTO43592 962 aaKnown RBP23.6■■□□□ 1.37
SMAD1-201ENST00000302085 RPLP2P05387 115 aaKnown RBP23.6■■□□□ 1.37
SMAD1-201ENST00000302085 TNFRSF8P28908 595 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 GPD2P43304 727 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 ACLYP53396 1101 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 IFT20Q8IY31 132 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 UBA3Q8TBC4 463 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 DDX27Q96GQ7 796 aaKnown RBP23.6■■□□□ 1.37
SMAD1-201ENST00000302085 SLITRK6Q9H5Y7 841 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 FAM105AQ9NUU6 356 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 M0QYV0 167 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 PLA2G4AP47712 749 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 TAS2R40P59535 323 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 MAP9Q49MG5 647 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 FBXO47Q5MNV8 452 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 LCLAT1Q6UWP7 414 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 DPH6Q7L8W6 267 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 C12orf29Q8N999 325 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 C3orf20Q8ND61 904 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 AENQ8WTP8 325 aaKnown RBP23.6■■□□□ 1.37
SMAD1-201ENST00000302085 ZFP42Q96MM3 310 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 MCEEQ96PE7 176 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 TRMT13Q9NUP7 481 aaKnown RBP23.6■■□□□ 1.37
SMAD1-201ENST00000302085 STRIP2Q9ULQ0 834 aa23.6■■□□□ 1.37
SMAD1-201ENST00000302085 GPR182O15218 404 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 CABYRO75952 493 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 MAN1A1P33908 653 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 OGDHQ02218 1023 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 ZNF252P-AS1Q0IIN9 211 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 TRADDQ15628 312 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 ACOT1Q86TX2 421 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 SLC13A5Q86YT5 568 aaPredicted RBP23.59■■□□□ 1.37
SMAD1-201ENST00000302085 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.59■■□□□ 1.37
SMAD1-201ENST00000302085 C18orf8Q96DM3 657 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 PPP1R10Q96QC0 940 aaKnown RBP23.59■■□□□ 1.37
SMAD1-201ENST00000302085 GDAP2Q9NXN4 497 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 AMACRQ9UHK6 382 aa23.59■■□□□ 1.37
SMAD1-201ENST00000302085 TCRBV7S2A1N4TA0A589 114 aa23.58■■□□□ 1.37
SMAD1-201ENST00000302085 ESYT3A0FGR9 886 aa23.58■■□□□ 1.37
SMAD1-201ENST00000302085 KPNA7A9QM74 516 aa23.58■■□□□ 1.37
SMAD1-201ENST00000302085 GNRH1P01148 92 aa23.58■■□□□ 1.37
SMAD1-201ENST00000302085 ERBB2P04626 1255 aa23.58■■□□□ 1.37
SMAD1-201ENST00000302085 PTK7Q13308 1070 aa23.58■■□□□ 1.37
SMAD1-201ENST00000302085 TRIM71Q2Q1W2 868 aaKnown RBP23.58■■□□□ 1.37
SMAD1-201ENST00000302085 CASKIN2Q8WXE0 1202 aa23.58■■□□□ 1.37
SMAD1-201ENST00000302085 USTQ9Y2C2 406 aa23.58■■□□□ 1.37
SMAD1-201ENST00000302085 BHMG1C9JSJ3 638 aaPredicted RBP23.58■■□□□ 1.36
SMAD1-201ENST00000302085 PFKMP08237 780 aa23.58■■□□□ 1.36
SMAD1-201ENST00000302085 PNPLA4P41247 253 aa23.58■■□□□ 1.36
SMAD1-201ENST00000302085 PSMC1P62191 440 aaKnown RBP23.58■■□□□ 1.36
SMAD1-201ENST00000302085 TAP1Q03518 808 aa23.58■■□□□ 1.36
SMAD1-201ENST00000302085 CASP8Q14790 479 aa23.58■■□□□ 1.36
SMAD1-201ENST00000302085 DCUN1D2Q6PH85 259 aa23.58■■□□□ 1.36
SMAD1-201ENST00000302085 GSTCDQ8NEC7 633 aa23.58■■□□□ 1.36
SMAD1-201ENST00000302085 ZNF560Q96MR9 790 aa23.58■■□□□ 1.36
SMAD1-201ENST00000302085 GOLGA6L10A0A0M3HER8 536 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 SIGLEC16A6NMB1 481 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 GOLGA8SH3BPF8 625 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 HSPA6P17066 643 aa23.57■■□□□ 1.36
SMAD1-201ENST00000302085 CD52P31358 61 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms