RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SEPT1Q8WYJ6 367 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PCDHB7Q9Y5E2 793 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 MBD5Q9P267 1494 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TRAPPC3O43617 180 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TCF7P36402 384 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ANGPT1Q15389 498 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TRIP10Q15642 601 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 C16orf89Q6UX73 402 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 CHSY1Q86X52 802 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 NOA1Q8NC60 698 aaKnown RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 BLOC1S5Q8TDH9 187 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HPDLQ96IR7 371 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 POP1Q99575 1024 aaKnown RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 PIF1Q9H611 641 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 LRRC7Q96NW7 1537 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 RASA1P20936 1047 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ABCE1P61221 599 aaKnown RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SYDE1Q6ZW31 735 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 SLC44A2Q8IWA5 706 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 STX19Q8N4C7 294 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 EPS8L3Q8TE67 593 aaKnown RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TSPAN17Q96FV3 270 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TARS2Q9BW92 718 aaKnown RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TEX13BQ9BXU2 312 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 UVRAGQ9P2Y5 699 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 H0Y626 953 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TRIM16O95361 564 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 GLRBP48167 497 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ALDH6A1Q02252 535 aaKnown RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ARHGAP18Q8N392 663 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TTC39CQ8N584 583 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 ZKSCAN4Q969J2 545 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 TRIM62Q9BVG3 475 aa14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 POLR1AO95602 1720 aaPredicted RBP14.15□□□□□ -0.14
CHRFAM7A-201ENST00000299847 HECW2Q9P2P5 1572 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 IGF2BP3O00425 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SMNDC1O75940 238 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KLRC1P26715 233 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CTCFP49711 727 aaPredicted RBP14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SV2CQ496J9 727 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PHF21AQ96BD5 680 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MXRA8Q9BRK3 442 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZNRF3Q9ULT6 936 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SMG5Q9UPR3 1016 aaKnown RBP14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DTNAQ9Y4J8 743 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DDX39BQ13838 428 aaKnown RBP14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PRR5LQ6MZQ0 368 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PLEKHG2Q9H7P9 1386 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 EXTL3O43909 919 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 POLBP06746 335 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CYP2C9P11712 490 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ATP6V1B1P15313 513 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DNAJC3Q13217 504 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SLC29A2Q14542 456 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 C16orf86Q6ZW13 317 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PNKPQ96T60 521 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ALG6Q9Y672 507 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 LINC00854A0A1B0GVQ3 168 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 JADE3Q92613 823 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KCNH7Q9NS40 1196 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SPASTQ9UBP0 616 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CNTNAP5Q8WYK1 1306 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 EFCAB14O75071 495 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GLI2P10070 1586 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 IER5Q5VY09 327 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TMED8Q6PL24 325 aaPredicted RBP14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TRPM8Q7Z2W7 1104 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 FAM111AQ96PZ2 611 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CCSER1Q9C0I3 900 aa14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 H2AFY2Q9P0M6 372 aaPredicted RBP14.14□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ARHGAP31Q2M1Z3 1444 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PARNO95453 639 aaKnown RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NUDT2P50583 147 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DIS3LQ8TF46 1054 aaKnown RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ATG4CQ96DT6 458 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CINPQ9BW66 212 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TMEM8AQ9HCN3 771 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CYP4F12Q9HCS2 524 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 QRICH2Q9H0J4 1663 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 OVOS2A0A0G2JMS6 1433 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 OVOS2A0A0J9YW53 1432 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 OVOS2Q6IE36 1432 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 M0QYT0 321 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 VTNP04004 478 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KCNK10P57789 538 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 WASHC5Q12768 1159 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DYNC1I2Q13409 638 aaKnown RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MED21Q13503 144 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 FEZF2Q8TBJ5 459 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GJD4Q96KN9 370 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 IL25Q9H293 177 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PGK2P07205 417 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 COILP38432 576 aaPredicted RBP14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CAPZA2P47755 286 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SKOR1P84550 965 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SNAPC2Q13487 334 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KLHDC7AQ5VTJ3 777 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KCNV1Q6PIU1 500 aa14.13□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TFB1MQ8WVM0 346 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms