RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 KCNA2P16389 499 aa14.19□□□□□ -0.14
CTDP1-202ENST00000299543 ORC1Q13415 861 aa14.19□□□□□ -0.14
CTDP1-202ENST00000299543 ABRAQ8N0Z2 381 aa14.19□□□□□ -0.14
CTDP1-202ENST00000299543 TRIM11Q96F44 468 aa14.19□□□□□ -0.14
CTDP1-202ENST00000299543 NTPCRQ9BSD7 190 aaKnown RBP14.19□□□□□ -0.14
CTDP1-202ENST00000299543 PITPNM3Q9BZ71 974 aa14.19□□□□□ -0.14
CTDP1-202ENST00000299543 NXF1Q9UBU9 619 aaKnown RBP14.19□□□□□ -0.14
CTDP1-202ENST00000299543 NEU2Q9Y3R4 380 aa14.19□□□□□ -0.14
CTDP1-202ENST00000299543 C4BPAP04003 597 aaKnown RBP14.18□□□□□ -0.14
CTDP1-202ENST00000299543 FDX1P10109 184 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ATP2A2P16615 1042 aaKnown RBP14.18□□□□□ -0.14
CTDP1-202ENST00000299543 MAN1A1P33908 653 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ERFP50548 548 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 NOMO3P69849 1222 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 TFAMQ00059 246 aaKnown RBP14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ROR2Q01974 943 aaKnown RBP14.18□□□□□ -0.14
CTDP1-202ENST00000299543 SP2Q02086 613 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 CNTN2Q02246 1040 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 DNAJC3Q13217 504 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 KCNT1Q5JUK3 1230 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 TXNRD3NBQ6F5E7 133 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ARHGAP22Q7Z5H3 698 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ZBED8Q8IZ13 594 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ZNF606Q8WXB4 792 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 TMEM121Q9BTD3 319 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 HAPLN2Q9GZV7 340 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 DLGAP2Q9P1A6 1054 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ZNF232Q9UNY5 417 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 AGTPBP1Q9UPW5 1226 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 KIF13BQ9NQT8 1826 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 DKC1O60832 514 aaKnown RBP eCLIP14.18□□□□□ -0.14
CTDP1-202ENST00000299543 KRT19P08727 400 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 TNFSF9P41273 254 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 TNFAIP1Q13829 316 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 FKBP1CQ5VVH2 108 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 RHBDF2Q6PJF5 856 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 MON1BQ7L1V2 547 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ANKRD35Q8N283 1001 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 AGBL3Q8NEM8 1001 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 FEZF2Q8TBJ5 459 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 GORASP1Q9BQQ3 440 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 ZNF302Q9NR11 478 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 KLHL14Q9P2G3 628 aa14.18□□□□□ -0.14
CTDP1-202ENST00000299543 TTLL13PA6NNM8 815 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 PMM2O15305 246 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 CDH16O75309 829 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 CENPCQ03188 943 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 ITIH4Q14624 930 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 XKR3Q5GH77 459 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 MFSD5Q6N075 450 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 DNAJC24Q6P3W2 148 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 TMEM154Q6P9G4 183 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 FAM210AQ96ND0 272 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 TMEM109Q9BVC6 243 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 AVENQ9NQS1 362 aaPredicted RBP14.17□□□□□ -0.14
CTDP1-202ENST00000299543 GLRA2P23416 452 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 BACE1P56817 501 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 CCNG2Q16589 344 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 FOXB2Q5VYV0 432 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 CRELD2Q6UXH1 353 aaPredicted RBP14.17□□□□□ -0.14
CTDP1-202ENST00000299543 ARHGEF18Q6ZSZ5 1173 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 MFN1Q8IWA4 741 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 THNSL1Q8IYQ7 743 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 GPRASP2Q96D09 838 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 MTMR12Q9C0I1 747 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 ARHGAP28Q9P2N2 729 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 HACL1Q9UJ83 578 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 ZNF268Q14587 947 aaPredicted RBP14.17□□□□□ -0.14
CTDP1-202ENST00000299543 TMEM132BQ14DG7 1078 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 PSMD6Q15008 389 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 LMNTD2Q8IXW0 634 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 P3H4Q92791 437 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 SENP7Q9BQF6 1050 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 C17orf75Q9HAS0 396 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 PARVAQ9NVD7 372 aa14.17□□□□□ -0.14
CTDP1-202ENST00000299543 GOLGA8RI6L899 631 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 GHRP10912 638 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 TRPC3Q13507 836 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 RBM41Q96IZ5 413 aaKnown RBP14.16□□□□□ -0.14
CTDP1-202ENST00000299543 RMDN2Q96LZ7 410 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 KLF6Q99612 283 aaPredicted RBP14.16□□□□□ -0.14
CTDP1-202ENST00000299543 SYNCQ9H7C4 482 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 SLCO1B3Q9NPD5 702 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 PCSK1NQ9UHG2 260 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 CA4P22748 312 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 MYL6P60660 151 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 PDIA2Q13087 525 aaKnown RBP14.16□□□□□ -0.14
CTDP1-202ENST00000299543 SEPT7Q16181 437 aaKnown RBP14.16□□□□□ -0.14
CTDP1-202ENST00000299543 VSIG1Q86XK7 387 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 TEPSINQ96N21 525 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 PPP1R16BQ96T49 567 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 CYP1A1P04798 512 aaPredicted RBP14.16□□□□□ -0.14
CTDP1-202ENST00000299543 PKN2Q16513 984 aaKnown RBP14.16□□□□□ -0.14
CTDP1-202ENST00000299543 GPAT2Q6NUI2 795 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 TMEM130Q8N3G9 435 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 LRRC71Q8N4P6 559 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 ZNF280CQ8ND82 737 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 CKAP2Q8WWK9 683 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms