RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 G3BP2Q9UN86 482 aaKnown RBP16.44■□□□□ 0.22
UBAP1-201ENST00000297661 USH1CQ9Y6N9 552 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 MAPK13O15264 365 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 GGPS1O95749 300 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 PYGBP11216 843 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 TNNI1P19237 187 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 ITGA8P53708 1063 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 CCDC6Q16204 474 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 ZBTB41Q5SVQ8 909 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 TAS1R3Q7RTX0 852 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 ANKS1BQ7Z6G8 1248 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 SRRM1Q8IYB3 904 aaKnown RBP16.44■□□□□ 0.22
UBAP1-201ENST00000297661 KLHL23Q8NBE8 558 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 SH3TC2Q8TF17 1288 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 ZBTB45Q96K62 511 aaPredicted RBP16.44■□□□□ 0.22
UBAP1-201ENST00000297661 COQ4Q9Y3A0 265 aa16.44■□□□□ 0.22
UBAP1-201ENST00000297661 LGR5O75473 907 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 TOMM70O94826 608 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 RALAP11233 206 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 JAK3P52333 1124 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 LMNB2Q03252 620 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 USP4Q13107 963 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 TNFAIP1Q13829 316 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 KHDC1Q4VXA5 237 aaKnown RBP16.43■□□□□ 0.22
UBAP1-201ENST00000297661 TRIM74Q86UV6 250 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 TRIM73Q86UV7 250 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 MCOLN2Q8IZK6 566 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 ZC3H15Q8WU90 426 aaKnown RBP16.43■□□□□ 0.22
UBAP1-201ENST00000297661 VTI1AQ96AJ9 217 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 MFSD14AQ96MC6 490 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 PAIP2Q9BPZ3 127 aaKnown RBP16.43■□□□□ 0.22
UBAP1-201ENST00000297661 PCDHA10Q9Y5I2 948 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 LMNAP02545 664 aaKnown RBP16.43■□□□□ 0.22
UBAP1-201ENST00000297661 HARSP12081 509 aaKnown RBP16.43■□□□□ 0.22
UBAP1-201ENST00000297661 SKIP12755 728 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 CD58P19256 250 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 ADCY8P40145 1251 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 RASSF2P50749 326 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 CACNA2D1P54289 1103 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
UBAP1-201ENST00000297661 MTERF2Q49AM1 385 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 HP1BP3Q5SSJ5 553 aaPredicted RBP16.43■□□□□ 0.22
UBAP1-201ENST00000297661 SNX30Q5VWJ9 437 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 GPD1LQ8N335 351 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 ATL2Q8NHH9 583 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 TMEM143Q96AN5 459 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 LRRC19Q9H756 370 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 XPNPEP1Q9NQW7 623 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 RNF146Q9NTX7 359 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 CHCHD3Q9NX63 227 aaKnown RBP16.43■□□□□ 0.22
UBAP1-201ENST00000297661 RPS6KL1Q9Y6S9 549 aa16.43■□□□□ 0.22
UBAP1-201ENST00000297661 FSCN2O14926 492 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 KRT76Q01546 638 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 CST9Q5W186 159 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 PPP1R21Q6ZMI0 780 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 ZC3H18Q86VM9 953 aaKnown RBP16.42■□□□□ 0.22
UBAP1-201ENST00000297661 CCNJLQ8IV13 435 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 CCDC60Q8IWA6 550 aaPredicted RBP16.42■□□□□ 0.22
UBAP1-201ENST00000297661 STARD13Q9Y3M8 1113 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 PI4K2BG5E9Z4 385 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 NR3C2P08235 984 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 UNGP13051 313 aaPredicted RBP16.42■□□□□ 0.22
UBAP1-201ENST00000297661 TAS2R40P59535 323 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 IL9RQ01113 521 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 DNAJC3Q13217 504 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 ATP13A4Q4VNC1 1196 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 FAM83AQ86UY5 434 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 SCG3Q8WXD2 468 aaKnown RBP16.42■□□□□ 0.22
UBAP1-201ENST00000297661 POLR3FQ9H1D9 316 aaPredicted RBP16.42■□□□□ 0.22
UBAP1-201ENST00000297661 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 UMODL1Q5DID0 1318 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 MYPNQ86TC9 1320 aa16.42■□□□□ 0.22
UBAP1-201ENST00000297661 DOCK5Q9H7D0 1870 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 DCTN3O75935 186 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 RGS20O76081 388 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 MARK3P27448 753 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 DSG3P32926 999 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 SERPINB4P48594 390 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 RFWD3Q6PCD5 774 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 MORC4Q8TE76 937 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 NRG4Q8WWG1 115 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 SPOCK2Q92563 424 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 DTNBP1Q96EV8 351 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 C9orf72Q96LT7 481 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 PHTF1Q9UMS5 762 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 RPL26L1Q9UNX3 145 aaKnown RBP16.41■□□□□ 0.22
UBAP1-201ENST00000297661 LOXHD1Q8IVV2 1947 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 CENPFP49454 3210 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 PEX10O60683 326 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 HLA-DRAP01903 254 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 CETPP11597 493 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 TCF4P15884 667 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 PIK3CAP42336 1068 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 NSFP46459 744 aaKnown RBP16.41■□□□□ 0.22
UBAP1-201ENST00000297661 WDR4P57081 412 aaKnown RBP16.41■□□□□ 0.22
UBAP1-201ENST00000297661 MOGSQ13724 837 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 ZFYVE27Q5T4F4 411 aa16.41■□□□□ 0.22
UBAP1-201ENST00000297661 TDRD10Q5VZ19 366 aaKnown RBP16.41■□□□□ 0.22
UBAP1-201ENST00000297661 KAZNQ674X7 775 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms