RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 KHDRBS2Q5VWX1 349 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 IFT43Q96FT9 208 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 MMTAG2Q9BU76 263 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 STOML2Q9UJZ1 356 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 MYO9BQ13459 2157 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 KCNJ1P48048 391 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 TFDP2Q14188 446 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 METTL16Q86W50 562 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 CDKL3Q8IVW4 592 aaPredicted RBP12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 UBXN6Q9BZV1 441 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 RNPEPL1Q9HAU8 725 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 MROH5Q6ZUA9 1318 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 GEMIN4P57678 1058 aaKnown RBP12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 SLC10A5Q5PT55 438 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 ANKRD40Q6AI12 368 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 CCSAPQ6IQ19 270 aaPredicted RBP12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 ZNF577Q9BSK1 485 aa12.23□□□□□ -0.45
SHROOM3-201ENST00000296043 A8MXQ7 604 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 NAA20P61599 178 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 EFR3AQ14156 821 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 SPOUT1Q5T280 376 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 IZUMO1Q8IYV9 350 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 FLT4P35916 1363 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 NEURL1BA8MQ27 555 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 SPIDRQ14159 915 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 CYP51A1Q16850 503 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 TAF2Q6P1X5 1199 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 FBXO11Q86XK2 927 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 BSDC1Q9NW68 430 aaPredicted RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 HUS1O60921 280 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 SPAG6O75602 509 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 GCLCP48506 637 aaPredicted RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ZFP69Q49AA0 526 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 POU5F2Q8N7G0 328 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 TC2NQ8N9U0 490 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 PPP1R16BQ96T49 567 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 AGPAT5Q9NUQ2 364 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 FAM196BA6NMK8 535 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 SNRPAP09012 282 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ALDH6A1Q02252 535 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 TUBA3CQ13748 450 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ZNF394Q53GI3 561 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 OTUD3Q5T2D3 398 aaPredicted RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 TUBA3EQ6PEY2 450 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 SERPINB12Q96P63 405 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 DDX50Q9BQ39 737 aaKnown RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ECSITQ9BQ95 431 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 L2HGDHQ9H9P8 463 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 MLXQ9UH92 298 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 NOTOA8MTQ0 251 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 TK2O00142 265 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 FKBP6O75344 327 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 BGNP21810 368 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ADSLP30566 484 aaPredicted RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 DDR2Q16832 855 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 SCARA3Q6AZY7 606 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 GET4Q7L5D6 327 aaPredicted RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 SPICE1Q8N0Z3 855 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 TMEM206Q9H813 350 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 SLC12A6Q9UHW9 1150 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 CHRNB3Q05901 458 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 PYDC2Q56P42 97 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 MNTQ99583 582 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 DFFAO00273 331 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 NRF1Q16656 503 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 VN1R5Q7Z5H4 357 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 USP38Q8NB14 1042 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ADGRL1O94910 1474 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 POTEMA6NI47 508 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 EVPLLA8MZ36 301 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ATP9BO43861 1147 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 HSF2Q03933 536 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 KCNT1Q5JUK3 1230 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ERP44Q9BS26 406 aa12.22□□□□□ -0.45
SHROOM3-201ENST00000296043 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 ERICH5Q6P6B1 374 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 PRUNE1Q86TP1 453 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 KYQ8NBH2 561 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 C18orf8Q96DM3 657 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 CNPY3Q9BT09 278 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 ZC3H12CQ9C0D7 883 aaKnown RBP12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 ARMCX1Q9P291 453 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 TRPC5OSA6NMA1 111 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 SYNCRIPO60506 623 aaKnown RBP12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 IL12AP29459 219 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 NDUFAF2Q8N183 169 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 STARP49675 285 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 SNX31Q8N9S9 440 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 ARPC4-TTLL3A0A0A6YYG9 625 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 FAM92AA1XBS5 289 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 CHL1O00533 1208 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 ALFQ53S48 1182 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 CACTIN-AS1Q8N1I8 211 aa12.21□□□□□ -0.45
SHROOM3-201ENST00000296043 GTF2A1LQ9UNN4 478 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms