RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 RIN2Q8WYP3 895 aaPredicted RBP16.15■□□□□ 0.18
CCDC140-201ENST00000295226 FAXDC2Q96IV6 333 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 FAM81BQ96LP2 452 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 TGS1Q96RS0 853 aaKnown RBP16.15■□□□□ 0.18
CCDC140-201ENST00000295226 TTPALQ9BTX7 342 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 STXBP5LQ9Y2K9 1186 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 MYO7AQ13402 2215 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 TSC2P49815 1807 aa16.15■□□□□ 0.18
CCDC140-201ENST00000295226 SYN3O14994 580 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 SOD2P04179 222 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 OR4Q2P0C623 313 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 RPL17P18621 184 aaKnown RBP16.14■□□□□ 0.18
CCDC140-201ENST00000295226 TYMPP19971 482 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 PAX3P23760 479 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 ERVK-21P61565 698 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 YWHAEP62258 255 aaKnown RBP16.14■□□□□ 0.18
CCDC140-201ENST00000295226 ELAVL2Q12926 359 aaKnown RBP16.14■□□□□ 0.18
CCDC140-201ENST00000295226 RAB30Q15771 203 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 USP41Q3LFD5 358 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 RSPO2Q6UXX9 243 aaPredicted RBP16.14■□□□□ 0.18
CCDC140-201ENST00000295226 IRF2BP2Q7Z5L9 587 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 C12orf29Q8N999 325 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 OR8K1Q8NGG5 319 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 OR10T2Q8NGX3 314 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 SPPL3Q8TCT6 385 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 ARNTL2Q8WYA1 636 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 JAKMIP2Q96AA8 810 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 ABHD10Q9NUJ1 306 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 PUF60Q9UHX1 559 aaKnown RBP16.14■□□□□ 0.18
CCDC140-201ENST00000295226 DSEQ9UL01 958 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 CNTN6Q9UQ52 1028 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 PCDHGC5Q9Y5F6 944 aa16.14■□□□□ 0.18
CCDC140-201ENST00000295226 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 GRM6O15303 877 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 PLEKP08567 350 aaPredicted RBP16.14■□□□□ 0.17
CCDC140-201ENST00000295226 LHX1P48742 406 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 ZNF132P52740 706 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 ERVFC1P60507 584 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 MRPL58Q14197 206 aaKnown RBP16.14■□□□□ 0.17
CCDC140-201ENST00000295226 ASIC2Q16515 512 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 KIAA1841Q6NSI8 718 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 WDR59Q6PJI9 974 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 GLYCTKQ8IVS8 523 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 CCDC112Q8NEF3 446 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 LNX1Q8TBB1 728 aaPredicted RBP16.14■□□□□ 0.17
CCDC140-201ENST00000295226 TFAP2BQ92481 460 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 TIFAQ96CG3 184 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 IQCDQ96DY2 449 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 TMEM176AQ96HP8 235 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 HEXIM2Q96MH2 286 aaKnown RBP16.14■□□□□ 0.17
CCDC140-201ENST00000295226 DNAJC7Q99615 494 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 ZSWIM1Q9BR11 485 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 NT5C1AQ9BXI3 368 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 SLC28A3Q9HAS3 691 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 CHST7Q9NS84 486 aa16.14■□□□□ 0.17
CCDC140-201ENST00000295226 RFXAPO00287 272 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 ADAM12O43184 909 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 OAZ2O95190 189 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 CD19P15391 556 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 BRD2P25440 801 aaKnown RBP16.13■□□□□ 0.17
CCDC140-201ENST00000295226 CA8P35219 290 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 ARPP19P56211 112 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 CTXN3Q4LDR2 81 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 TAF3Q5VWG9 929 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 LRRTM3Q86VH5 581 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 CNGA4Q8IV77 575 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 FBXO22Q8NEZ5 403 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 SLC20A1Q8WUM9 679 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 POF1BQ8WVV4 589 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 CHP1Q99653 195 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 HERC2P3Q9BVR0 1158 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 PLVAPQ9BX97 442 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 CRTAC1Q9NQ79 661 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 FAM49BQ9NUQ9 324 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 AIPL1Q9NZN9 384 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 GTF3C4Q9UKN8 822 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 RWDD3Q9Y3V2 267 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 DAAM1Q9Y4D1 1078 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 CDH23Q9H251 3354 aa16.13■□□□□ 0.17
CCDC140-201ENST00000295226 MYBPHLA2RUH7 354 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 C5orf67F2Z3F1 127 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 CFHP08603 1231 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 PTPN1P18031 435 aaKnown RBP16.12■□□□□ 0.17
CCDC140-201ENST00000295226 GLUD2P49448 558 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 SMAD3P84022 425 aaKnown RBP16.12■□□□□ 0.17
CCDC140-201ENST00000295226 NOP9Q86U38 636 aaKnown RBP16.12■□□□□ 0.17
CCDC140-201ENST00000295226 UNC93AQ86WB7 457 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 THEM5Q8N1Q8 247 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 SYT15Q9BQS2 421 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 TMLHEQ9NVH6 421 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 MYO6Q9UM54 1294 aa16.12■□□□□ 0.17
CCDC140-201ENST00000295226 ARHGEF37A1IGU5 675 aa16.11■□□□□ 0.17
CCDC140-201ENST00000295226 KIF2AO00139 706 aaPredicted RBP16.11■□□□□ 0.17
CCDC140-201ENST00000295226 CCP110O43303 1012 aa16.11■□□□□ 0.17
CCDC140-201ENST00000295226 TUBB4AP04350 444 aa16.11■□□□□ 0.17
CCDC140-201ENST00000295226 FAM163BP0C2L3 166 aa16.11■□□□□ 0.17
CCDC140-201ENST00000295226 CCDC130P13994 396 aa16.11■□□□□ 0.17
CCDC140-201ENST00000295226 CYP11B1P15538 503 aa16.11■□□□□ 0.17
CCDC140-201ENST00000295226 FERP16591 822 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms