RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SENP7Q9BQF6 1050 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 C11orf70Q9BRQ4 267 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 SMARCAD1Q9H4L7 1026 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 IP6K2Q9UHH9 426 aa12.44□□□□□ -0.42
SYNGAP1-201ENST00000293748 LOC285556D6RIA3 1793 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 THSD7BQ9C0I4 1608 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 DNAJC6O75061 913 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 PMLP29590 882 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 PEX3P56589 373 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 YWHAHQ04917 246 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 FRMD5Q7Z6J6 570 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 MCPH1Q8NEM0 835 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 HSPH1Q92598 858 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 THAP11Q96EK4 314 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 PHF20Q9BVI0 1012 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 CYP4F11Q9HBI6 524 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 DDX56Q9NY93 547 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 SORBS3O60504 671 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 PPP1R11O60927 126 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 APOA1P02647 267 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 KITP10721 976 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 FXR1P51114 621 aaKnown RBP eCLIP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 RAD9BQ6WBX8 426 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 RIN2Q8WYP3 895 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 HEXIM2Q96MH2 286 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 CCSER1Q9C0I3 900 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 INTS2Q9H0H0 1204 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 DONSONQ9NYP3 566 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 EIF4E1BA6NMX2 242 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 H3BRJ5 948 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 SOX5P35711 763 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 PPP6R3Q5H9R7 873 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 CYFIP1Q7L576 1253 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 ROPN1BQ9BZX4 212 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 ROPN1Q9HAT0 212 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 SLC40A1Q9NP59 571 aa12.43□□□□□ -0.42
SYNGAP1-201ENST00000293748 KCNA4P22459 653 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 TBXAS1P24557 533 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 KRT17Q04695 432 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 GTSE1Q9NYZ3 720 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 ARHGEF37A1IGU5 675 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 KIF28PB7ZC32 967 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 MEIS2O14770 477 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF185O15231 689 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 ITIH2P19823 946 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 AARSP49588 968 aaKnown RBP eCLIP12.42□□□□□ -0.422e-7■■□□□ 13.7
SYNGAP1-201ENST00000293748 MLLT1Q03111 559 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 CNGA3Q16281 694 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 PTGISQ16647 500 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 MTERF2Q49AM1 385 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 RYBPQ8N488 228 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 KLHL8Q9P2G9 620 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 MAGED2Q9UNF1 606 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 E9PMD0 336 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 PI4K2BG5E9Z4 385 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 GOLGA8MH3BSY2 632 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 SNAI1O95863 264 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 H2AFXP16104 143 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 FUT2Q10981 343 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 AFG1LQ8WV93 481 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 NCLNQ969V3 563 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 RIT2Q99578 217 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 TYW5A2RUC4 315 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 FGFR4P22455 802 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 PPARGP37231 505 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 SERPINB10P48595 397 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 VAMP7P51809 220 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 PKN1Q16512 942 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 PDXDC2PQ6P474 469 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 RDM1Q8NG50 284 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZIM3Q96PE6 472 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 KCNK16Q96T55 309 aa12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 RPF1Q9H9Y2 349 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-201ENST00000293748 hCG_2014768A0A024R1R8 64 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 SFI1A8K8P3 1242 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 TBX3O15119 743 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 IL10P22301 178 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 MARK3P27448 753 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 CTGFP29279 349 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 ATICP31939 592 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 SLC1A1P43005 524 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 CRYMQ14894 314 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 HIF1AQ16665 826 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 ANKRD40Q6AI12 368 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 LONP2Q86WA8 852 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 METTL23Q86XA0 190 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 CCNYL1Q8N7R7 359 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 CCDC90BQ9GZT6 254 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 BFARQ9NZS9 450 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 CASP8AP2Q9UKL3 1982 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 FAM47DPA6NHR8 397 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 PHF2O75151 1096 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 DEAF1O75398 565 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 SYF2O95926 243 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms