RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 DUSP10Q9Y6W6 482 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 AOC2O75106 756 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 ARP10275 920 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 ATP6V1B1P15313 513 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 TPP2P29144 1249 aaPredicted RBP11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 GPC5P78333 572 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 AP1B1Q10567 949 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 FSCBQ5H9T9 825 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 MRPL47Q9HD33 250 aaKnown RBP11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 ANAPC7Q9UJX3 599 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 UBE4BO95155 1302 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 SSU72P8A0A1W2PR75 194 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 HSPA4LO95757 839 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 ZNF286BP0CG31 522 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 KLRC1P26715 233 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 NEK2P51955 445 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 STAT4Q14765 748 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 SLC18A3Q16572 532 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 GLYCTKQ8IVS8 523 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 MFN1Q8IWA4 741 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 SH3TC2Q8TF17 1288 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 ING2Q9H160 280 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 DPP7Q9UHL4 492 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 B2RBV5 119 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 CRHR2Q13324 411 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 PAPD7Q5XG87 772 aaKnown RBP11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 C1orf228Q6PIY5 440 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 GMLQ99445 158 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
NPC1L1-201ENST00000289547 DARS2Q6PI48 645 aaKnown RBP11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 BBS5Q8N3I7 341 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 SENP7Q9BQF6 1050 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 CALN1Q9BXU9 219 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 SEPT10Q9P0V9 454 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 FAM47DPA6NHR8 397 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 CYP11B2P19099 503 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 CASP2P42575 452 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 AARSP49588 968 aaKnown RBP eCLIP11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 MRPS15P82914 257 aaKnown RBP11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 THOC5Q13769 683 aaKnown RBP11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 RINT1Q6NUQ1 792 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 SCARA5Q6ZMJ2 495 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 DEFB128Q7Z7B8 93 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 SCN4BQ8IWT1 228 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 YAF2Q8IY57 180 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 C4orf33Q8N1A6 199 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 RFFLQ8WZ73 363 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 SNF8Q96H20 258 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 C9orf72Q96LT7 481 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 LACRTQ9GZZ8 138 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 WWP1Q9H0M0 922 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 HAO1Q9UJM8 370 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 ZNF229Q9UJW7 825 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 GOLGA8RI6L899 631 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 HSPA8P11142 646 aaKnown RBP11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 CD58P19256 250 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 DPYDQ12882 1025 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 C4orf19Q8IY42 314 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 CNOT8Q9UFF9 292 aaKnown RBP11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 PCDHB12Q9Y5F1 795 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 KDM3BQ7LBC6 1761 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 RBP5P82980 135 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 KLHL38Q2WGJ6 581 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 ZBED8Q8IZ13 594 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 REPS2Q8NFH8 660 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 TNIP3Q96KP6 325 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 SENP1Q9P0U3 644 aa11.92□□□□□ -0.5
NPC1L1-201ENST00000289547 RSPH10B2B2RC85 870 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 TMCC1O94876 653 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 RSPH10BP0C881 870 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 FDPSP14324 419 aaKnown RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 DNAJC3Q13217 504 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 TMEM132DQ14C87 1099 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 CELF3Q5SZQ8 465 aaKnown RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 IZUMO3Q5VZ72 239 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 GUF1Q8N442 669 aaKnown RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 GHRP10912 638 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 CACNA2D1P54289 1103 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 CD302Q8IX05 232 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 NMD3Q96D46 503 aaKnown RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 SIKE1Q9BRV8 207 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 TRIM62Q9BVG3 475 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 GOLPH3Q9H4A6 298 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 DCLRE1BQ9H816 532 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 SETD4Q9NVD3 440 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 KANSL3Q9P2N6 904 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 ORC6Q9Y5N6 252 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 KRT38O76015 456 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 CTDNEP1O95476 244 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 KRT75O95678 551 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 S100BP04271 92 aaPredicted RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 FAM200BP0CF97 657 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 NAMPTP43490 491 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 OR1G1P47890 313 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 CPA2P48052 419 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 PDIA2Q13087 525 aaKnown RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 IKBKEQ14164 716 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms