RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 RNF14Q9UBS8 474 aa10.32□□□□□ -0.76
LRTOMT-201ENST00000289488 TUBGCP4Q9UGJ1 667 aa10.32□□□□□ -0.76
LRTOMT-201ENST00000289488 FAM153AQ9UHL3 310 aa10.32□□□□□ -0.76
LRTOMT-201ENST00000289488 TPX2Q9ULW0 747 aaKnown RBP10.32□□□□□ -0.76
LRTOMT-201ENST00000289488 NUB1Q9Y5A7 615 aa10.32□□□□□ -0.76
LRTOMT-201ENST00000289488 PCDHA13Q9Y5I0 950 aa10.32□□□□□ -0.76
LRTOMT-201ENST00000289488 EYSQ5T1H1 3165 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 RALGAPA2Q2PPJ7 1873 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 FOXN3O00409 490 aaPredicted RBP10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 P4HA2O15460 535 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 HEXIM1O94992 359 aaKnown RBP10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 LCA5LO95447 670 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 GLI1P08151 1106 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 ATF7P17544 494 aaPredicted RBP10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 BRD2P25440 801 aaKnown RBP10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 HNRNPH3P31942 346 aaKnown RBP10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 MLH1P40692 756 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 DRAP1Q14919 205 aaPredicted RBP10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 TMEM132DQ14C87 1099 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 PDXDC1Q6P996 788 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 ALKAL1Q6UXT8 129 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 CXorf38Q8TB03 319 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 HELQQ8TDG4 1101 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 LINC01599Q8WXQ3 324 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 SPAG5Q96R06 1193 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 TMBIM4Q9HC24 238 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 ARHGAP20Q9P2F6 1191 aa10.31□□□□□ -0.76
LRTOMT-201ENST00000289488 SMIM28A0A1B0GU29 152 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 F8VZ95 297 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 GFPT2O94808 682 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 IL18RAPO95256 599 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 CXCR5P32302 372 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 CLNS1AP54105 237 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 JAM2P57087 298 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 SOX4Q06945 474 aaPredicted RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 CFAP221Q4G0U5 840 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 HGSNATQ68CP4 663 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 LRIG3Q6UXM1 1119 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 AGMOQ6ZNB7 445 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 DEFB128Q7Z7B8 93 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 GSTCDQ8NEC7 633 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 DBF4BQ8NFT6 615 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 P3H4Q92791 437 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 GAD1Q99259 594 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 PSMB7Q99436 277 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 TMEM106CQ9BVX2 250 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 EPB41L5Q9HCM4 733 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 HAUS2Q9NVX0 235 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 TDRD15B5MCY1 1934 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 GMNCA6NCL1 334 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 C5orf60A6NFR6 353 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 GOLGA6L10A6NI86 522 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 DCDC2CA8MYV0 355 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 PTGESO14684 152 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 PMM2O15305 246 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 PJA2O43164 708 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 RTN2O75298 545 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 NEBLO76041 1014 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 PAX7P23759 505 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 POLR2BP30876 1174 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 HSPA9P38646 679 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 KIF11P52732 1056 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 YARSP54577 528 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 NOP14P78316 857 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 GUCY2DQ02846 1103 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 XRCC4Q13426 336 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 DSC3Q14574 896 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 LACTB2Q53H82 288 aaPredicted RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 SCARA5Q6ZMJ2 495 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 DNAAF5Q86Y56 855 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 ANKRD36BP1Q96IX9 119 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 XYLT2Q9H1B5 865 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 ASB7Q9H672 318 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 C11orf49Q9H6J7 331 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 PPANQ9NQ55 473 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 MIOSQ9NXC5 875 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 TNRC18O15417 2968 aaPredicted RBP10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 TANC1Q9C0D5 1861 aa10.3□□□□□ -0.76
LRTOMT-201ENST00000289488 TRAPPC3O43617 180 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 NCK2O43639 380 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 TNNC2P02585 160 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 RPLP2P05387 115 aaKnown RBP10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 IRX1P78414 480 aaPredicted RBP10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 BFSP2Q13515 415 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 SFMBT2Q5VUG0 894 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 MAATS1Q7Z4T9 603 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 IRF2BP2Q7Z5L9 587 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 IFT81Q8WYA0 676 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 NT5C1BQ96P26 610 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 TLR10Q9BXR5 811 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 STK33Q9BYT3 514 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 PRDM5Q9NQX1 630 aaPredicted RBP10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 CHST12Q9NRB3 414 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 DPP3Q9NY33 737 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 CNTN3Q9P232 1028 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 PLAAQ9Y263 795 aa10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.29□□□□□ -0.76
LRTOMT-201ENST00000289488 TTC3P53804 2025 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms