RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 FAM187AA6NFU0 413 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 PPEF2O14830 753 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 FSCN2O14926 492 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 MICAL2O94851 1124 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 HMGCRP04035 888 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 NDST1P52848 882 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 RPL7AP62424 266 aaKnown RBP10.78□□□□□ -0.68
C9orf43-201ENST00000288462 CAP1Q01518 475 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 DR1Q01658 176 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 NOGQ13253 232 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 TRADDQ15628 312 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 NBPF20Q3BBV1 942 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 C9orf57Q5W0N0 161 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 ADAT2Q7Z6V5 191 aaKnown RBP10.78□□□□□ -0.68
C9orf43-201ENST00000288462 FAM228AQ86W67 206 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 RHOT1Q8IXI2 618 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 KATNAL2Q8IYT4 538 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 NIPA2Q8N8Q9 360 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 C18orf25Q96B23 403 aaPredicted RBP10.78□□□□□ -0.68
C9orf43-201ENST00000288462 GPBP1L1Q9HC44 474 aaPredicted RBP10.78□□□□□ -0.68
C9orf43-201ENST00000288462 MTUS1Q9ULD2 1270 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 KIAA1257Q9ULG3 409 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 TRPV2Q9Y5S1 764 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 PGK1P00558 417 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 RARBP10826 455 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 PTGIRP43119 386 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 OGDHQ02218 1023 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 GABPB1Q06547 395 aaPredicted RBP10.78□□□□□ -0.68
C9orf43-201ENST00000288462 CACNB2Q08289 660 aaPredicted RBP10.78□□□□□ -0.68
C9orf43-201ENST00000288462 TRIM32Q13049 653 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 CNGA2Q16280 664 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 SGO2Q562F6 1265 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 GLRA4Q5JXX5 417 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 CYP4A22Q5TCH4 519 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 GDF6Q6KF10 455 aaPredicted RBP10.78□□□□□ -0.68
C9orf43-201ENST00000288462 TTC27Q6P3X3 843 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 CXCL17Q6UXB2 119 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 SESTD1Q86VW0 696 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 SMG8Q8ND04 991 aaKnown RBP10.78□□□□□ -0.68
C9orf43-201ENST00000288462 IFT81Q8WYA0 676 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 RUNDC3BQ96NL0 473 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 MCEEQ96PE7 176 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 RAB17Q9H0T7 212 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 SPC25Q9HBM1 224 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 MED4Q9NPJ6 270 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 IPPQ9Y573 584 aa10.78□□□□□ -0.68
C9orf43-201ENST00000288462 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.68
C9orf43-201ENST00000288462 SMIM28A0A1B0GU29 152 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 M0QYV0 167 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 CD4P01730 458 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 FAM153BP0C7A2 387 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 RARAP10276 462 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 CYP3A5P20815 502 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 AKAP5P24588 427 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 CST5P28325 142 aaPredicted RBP10.77□□□□□ -0.69
C9orf43-201ENST00000288462 GABRB2P47870 512 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 FNTAP49354 379 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 PDCLQ13371 301 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 STILQ15468 1287 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 FAM153CQ494X1 144 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 LRRC38Q5VT99 294 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 DAB2IPQ5VWQ8 1189 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 DUPD1Q68J44 220 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 LCLAT1Q6UWP7 414 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 PAXIP1Q6ZW49 1069 aaPredicted RBP10.77□□□□□ -0.69
C9orf43-201ENST00000288462 RPAINQ86UA6 219 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 SERINC5Q86VE9 423 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 XYLT1Q86Y38 959 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 JAMLQ86YT9 394 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 TSEN2Q8NCE0 465 aaKnown RBP10.77□□□□□ -0.69
C9orf43-201ENST00000288462 C18orf8Q96DM3 657 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 CPXM1Q96SM3 734 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 TRIM51Q9BSJ1 452 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 APOL6Q9BWW8 343 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 NT5C1AQ9BXI3 368 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 FAM114A2Q9NRY5 505 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 WDR35Q9P2L0 1181 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 FAM153AQ9UHL3 310 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 UTP11Q9Y3A2 253 aaKnown RBP10.77□□□□□ -0.69
C9orf43-201ENST00000288462 CDY2AQ9Y6F7 541 aa10.77□□□□□ -0.69
C9orf43-201ENST00000288462 PIRO00625 290 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 XPOTO43592 962 aaKnown RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 ERBB2P04626 1255 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 RPLP2P05387 115 aaKnown RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 ATF7P17544 494 aaPredicted RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 GPD2P43304 727 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 MGAT3Q09327 533 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 PIGHQ14442 188 aaPredicted RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 KLHDC9Q8NEP7 349 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 EXD1Q8NHP7 514 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 FAM71BQ8TC56 605 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 FNIP1Q8TF40 1166 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 MAIP1Q8WWC4 291 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 SLCO2A1Q92959 643 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 WNT8BQ93098 351 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 MAGOHBQ96A72 148 aaKnown RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 MRPL45Q9BRJ2 306 aaKnown RBP10.76□□□□□ -0.69
C9orf43-201ENST00000288462 HERPUD2Q9BSE4 406 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 CFHR5Q9BXR6 569 aa10.76□□□□□ -0.69
C9orf43-201ENST00000288462 SENP6Q9GZR1 1112 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms