RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TTPALQ9BTX7 342 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 NT5C1AQ9BXI3 368 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 ALG13Q9NP73 1137 aaKnown RBP23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 MEA1Q16626 185 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 USP41Q3LFD5 358 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 RSPO2Q6UXX9 243 aaPredicted RBP23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 TMEM139Q8IV31 216 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 VPS52Q8N1B4 723 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 CRYBG2Q8N1P7 616 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 TTC39CQ8N584 583 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 LNX1Q8TBB1 728 aaPredicted RBP23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 SPATA18Q8TC71 538 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 TFAP2BQ92481 460 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 PANX2Q96RD6 677 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 PLVAPQ9BX97 442 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 ARHGAP20Q9P2F6 1191 aa23.24■■□□□ 1.31
PDLIM3-203ENST00000284771 TBC1D4O60343 1298 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 CYP11B1P15538 503 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 FERP16591 822 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 PRKCIP41743 596 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 CDR1P51861 262 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 GSDMDP57764 484 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 ERVK-21P61565 698 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 PRSS55Q6UWB4 352 aaPredicted RBP23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 NOP9Q86U38 636 aaKnown RBP23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 METTL23Q86XA0 190 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 OLIG1Q8TAK6 271 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 EPS8L1Q8TE68 723 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 DDX1Q92499 740 aaKnown RBP23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 TGS1Q96RS0 853 aaKnown RBP23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 HAUS4Q9H6D7 363 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 CERS4Q9HA82 394 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 MSRAQ9UJ68 235 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 RWDD3Q9Y3V2 267 aa23.23■■□□□ 1.31
PDLIM3-203ENST00000284771 ARHGEF37A1IGU5 675 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 DNAJB1P25685 340 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 PSMC1P62191 440 aaKnown RBP23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 KRT17Q04695 432 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 RAB30Q15771 203 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 ASIC2Q16515 512 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 LRRTM3Q86VH5 581 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 LRRC8AQ8IWT6 810 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 SPPL3Q8TCT6 385 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 ACBD6Q9BR61 282 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 SYT11Q9BT88 431 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 CRTAC1Q9NQ79 661 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 NOCTQ9UK39 431 aaKnown RBP23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 COLQQ9Y215 455 aaPredicted RBP23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 TRIOBPQ9H2D6 2365 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 CFHP08603 1231 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 PAEPP09466 180 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 FECHP22830 423 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 DNAJB2P25686 324 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 DSG1Q02413 1049 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 PTK2Q05397 1052 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 CAMK1Q14012 370 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 SMYD5Q6GMV2 418 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 SLC20A1Q8WUM9 679 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 AUTS2Q8WXX7 1259 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 RIN2Q8WYP3 895 aaPredicted RBP23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 HEXIM2Q96MH2 286 aaKnown RBP23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 PKMYT1Q99640 499 aa23.22■■□□□ 1.31
PDLIM3-203ENST00000284771 MYO7AQ13402 2215 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 MYBPHLA2RUH7 354 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 GOLGA6L6A8MZA4 724 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 C2CD2LO14523 706 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 GNA15P30679 374 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 ZNF571Q7Z3V5 609 aaPredicted RBP23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 B3GALNT2Q8NCR0 500 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 ZNF606Q8WXB4 792 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 PIK3R5Q8WYR1 880 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 HERC2P3Q9BVR0 1158 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 ZBP1Q9H171 429 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 GTF3C4Q9UKN8 822 aa23.21■■□□□ 1.31
PDLIM3-203ENST00000284771 LILRB3O75022 631 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 SERPING1P05155 500 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 RB1P06400 928 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 OR4Q2P0C623 313 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 CHRNB2P17787 502 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 PTPN1P18031 435 aaKnown RBP23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 BRD2P25440 801 aaKnown RBP23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 ERVFC1P60507 584 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 SMAD3P84022 425 aaKnown RBP23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 KLHL30Q0D2K2 578 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 CTXN3Q4LDR2 81 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 PPP2R2DQ66LE6 453 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 THEM5Q8N1Q8 247 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 SYT15Q9BQS2 421 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 TMLHEQ9NVH6 421 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 CDH9Q9ULB4 789 aa23.2■■□□□ 1.3
PDLIM3-203ENST00000284771 MYO9BQ13459 2157 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 GRM6O15303 877 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 ADAM12O43184 909 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 RPL17P18621 184 aaKnown RBP23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 PCSK1P29120 753 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 SSTR3P32745 418 aaPredicted RBP23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 GLUD2P49448 558 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 CDK17Q00537 523 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 TSR1Q2NL82 804 aaKnown RBP23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 PPP1R26Q5T8A7 1209 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms