RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 PRMT7Q9NVM4 692 aaPredicted RBP12.4□□□□□ -0.42
SHPRH-201ENST00000275233 CPA4Q9UI42 421 aa12.4□□□□□ -0.42
SHPRH-201ENST00000275233 SLC39A10Q9ULF5 831 aa12.4□□□□□ -0.42
SHPRH-201ENST00000275233 CARSP49589 748 aaKnown RBP12.4□□□□□ -0.43
SHPRH-201ENST00000275233 DPF3Q92784 378 aa12.4□□□□□ -0.43
SHPRH-201ENST00000275233 MTMR12Q9C0I1 747 aa12.4□□□□□ -0.43
SHPRH-201ENST00000275233 YY1AP1Q9H869 796 aa12.4□□□□□ -0.43
SHPRH-201ENST00000275233 CRLS1Q9UJA2 301 aa12.4□□□□□ -0.43
SHPRH-201ENST00000275233 ZBTB39O15060 712 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 B3GAT3O94766 335 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 EPHB2P29323 1055 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 PTPN7P35236 360 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 GRIN1Q05586 938 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 STYK1Q6J9G0 422 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 SPATA21Q7Z572 469 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 ACOT1Q86TX2 421 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 UVRAGQ9P2Y5 699 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 SPASTQ9UBP0 616 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 ZNF286BP0CG31 522 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 MBL2P11226 248 aaPredicted RBP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 ACADSBP45954 432 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 TAF6P49848 677 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 ANTXR2P58335 489 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 KCTD17Q8N5Z5 321 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 PRMT6Q96LA8 375 aaPredicted RBP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 OSBPL8Q9BZF1 889 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 PLA2G4AP47712 749 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 FUT11Q495W5 492 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 RARS2Q5T160 578 aaKnown RBP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 LONP2Q86WA8 852 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 INPP5DQ92835 1189 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 DDIT4Q9NX09 232 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 STOML1Q9UBI4 398 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 CDYLQ9Y232 598 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 TAF6LQ9Y6J9 622 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 AP1G2O75843 785 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 ASS1P00966 412 aaKnown RBP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 ITGA8P53708 1063 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 PMS1P54277 932 aaKnown RBP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 C9orf131Q5VYM1 1079 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 POP1Q99575 1024 aaKnown RBP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 DTNAQ9Y4J8 743 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.39□□□□□ -0.43
SHPRH-201ENST00000275233 PDK1Q15118 436 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 SYTL2Q9HCH5 934 aa12.39□□□□□ -0.43
SHPRH-201ENST00000275233 ACO1P21399 889 aaKnown RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 CAPZA2P47755 286 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 GTF2A2P52657 109 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 GALNT4Q8N4A0 578 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 ZNF555Q8NEP9 628 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 FEZF2Q8TBJ5 459 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 TFB1MQ8WVM0 346 aaKnown RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 RPRD1AQ96P16 312 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 YME1L1Q96TA2 773 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 MRPL1Q9BYD6 325 aaKnown RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 NIF3L1Q9GZT8 377 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 NMRK2Q9NPI5 230 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 PHF20L1A8MW92 1017 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 POLBP06746 335 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 DDX5P17844 614 aaKnown RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 MAP3K7CLP57077 242 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 ABCE1P61221 599 aaKnown RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 ZNF177Q13360 481 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 ELMO3Q96BJ8 720 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 ZNF669Q96BR6 464 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 SPATA16Q9BXB7 569 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 RRN3P2A6NIE6 340 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 MSH4O15457 936 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 RAD51CO43502 376 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 INPP5AQ14642 412 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 EFHC1Q5JVL4 640 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 RABGAP1LQ5R372 815 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 FBXO33Q7Z6M2 555 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 ATP11BQ9Y2G3 1177 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 A0A1B0GTH6 734 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 ADCY3O60266 1144 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 EFCAB14O75071 495 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 SGPL1O95470 568 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 RAP1GDS1P52306 607 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 DDX39BQ13838 428 aaKnown RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 NAB2Q15742 525 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 MIER2Q8N344 545 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 TMEM169Q96HH4 297 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 TARSL2A2RTX5 802 aaKnown RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 CASTOR2A6NHX0 329 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 TBX3O15119 743 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 TTC39BQ5VTQ0 682 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 SYDE1Q6ZW31 735 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-201ENST00000275233 PARP9Q8IXQ6 854 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 SPIRE2Q8WWL2 714 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 KCTD10Q9H3F6 313 aa12.38□□□□□ -0.43
SHPRH-201ENST00000275233 AGRPO00253 132 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms