RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
PRUNE1-201ENST00000271620 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
PRUNE1-201ENST00000271620 AGTPBP1Q9UPW5 1226 aa11.44□□□□□ -0.58
PRUNE1-201ENST00000271620 PHIPQ8WWQ0 1821 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 FZD9O00144 591 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 IRF6O14896 467 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 MAP3K6O95382 1288 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 IQCF3P0C7M6 154 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 IL1R2P27930 398 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 MAPK6Q16659 721 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 DUOXA2Q1HG44 320 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 PTPN20Q4JDL3 420 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 SPOCD1Q6ZMY3 1216 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 ACO2Q99798 780 aaKnown RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 MRPL4Q9BYD3 311 aaKnown RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 NIFKQ9BYG3 293 aaKnown RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 C12orf65Q9H3J6 166 aaKnown RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 TRIM33Q9UPN9 1127 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 ARID2Q68CP9 1835 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 ATP2A1O14983 1001 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 CDH16O75309 829 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 USP2O75604 605 aaPredicted RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 TJP3O95049 919 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 KRT15P19012 456 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 PSMA2P25787 234 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 MAN1A1P33908 653 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 EFTUD2Q15029 972 aaKnown RBP eCLIP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 RAB6CQ53S08 254 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 LBX2Q6XYB7 198 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 TRIM72Q6ZMU5 477 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 TMEM35BQ8NCS4 154 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 SEPT1Q8WYJ6 367 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 RMDN2Q96LZ7 410 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 NIF3L1Q9GZT8 377 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 RAB6CQ9H0N0 254 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 SYNCQ9H7C4 482 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 ACTR5Q9H9F9 607 aaPredicted RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 SLCO1B3Q9NPD5 702 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 GINM1Q9NU53 330 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 RNF19AQ9NV58 838 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 BAIAP2L1Q9UHR4 511 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 MAFO75444 373 aaPredicted RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 GRAP2O75791 330 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 STAM2O75886 525 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 PIGRP01833 764 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 ZNF132P52740 706 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 DNAJC3Q13217 504 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 SH3PXD2AQ5TCZ1 1133 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 FAM228AQ86W67 206 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 SUGP1Q8IWZ8 645 aaKnown RBP11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 PARP9Q8IXQ6 854 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 ARFGAP1Q8N6T3 406 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 DNERQ8NFT8 737 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 CLMNQ96JQ2 1002 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 SPATC1LQ9H0A9 340 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
PRUNE1-201ENST00000271620 IGKV6D-21A0A0A0MT36 114 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 CST8O60676 142 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 HOXC6P09630 235 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 SSTR1P30872 391 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 FOXN2P32314 431 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 ASPAP45381 313 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 KCNJ2P63252 427 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 PDIA2Q13087 525 aaKnown RBP11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 PKN2Q16513 984 aaKnown RBP11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 TFDP3Q5H9I0 405 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 ANKRD22Q5VYY1 191 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 WDR49Q8IV35 697 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 RCOR2Q8IZ40 523 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 ACTL9Q8TC94 416 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 PPP1R13LQ8WUF5 828 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 HSPH1Q92598 858 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 VCPIP1Q96JH7 1222 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 TWNKQ96RR1 684 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 CPXM1Q96SM3 734 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 KLF6Q99612 283 aaPredicted RBP11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 ELP3Q9H9T3 547 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 TXNRD2Q9NNW7 524 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 PDGFCQ9NRA1 345 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 SNCAIPQ9Y6H5 919 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 POLR2AP24928 1970 aaKnown RBP11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 A0A1W2PPM1 405 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 ZBTB42B2RXF5 422 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 ADM5C9JUS6 153 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 GOLGA8RI6L899 631 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 KRT3P12035 628 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 GCAP28676 217 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 ICAM3P32942 547 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 CETN2P41208 172 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 Q3C1V9 767 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 SYDE1Q6ZW31 735 aaPredicted RBP11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 CROCCP2Q86T23 111 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 APOBEC3FQ8IUX4 373 aaKnown RBP11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 NLGN2Q8NFZ4 835 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 SGSM3Q96HU1 749 aa11.42□□□□□ -0.58
PRUNE1-201ENST00000271620 SPATA33Q96N06 139 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms