RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 LACTBP83111 547 aaPredicted RBP23.35■■□□□ 1.33
CDR2-201ENST00000268383 C1QBPQ07021 282 aaKnown RBP23.35■■□□□ 1.33
CDR2-201ENST00000268383 FNBP1LQ5T0N5 605 aa23.35■■□□□ 1.33
CDR2-201ENST00000268383 ABHD15Q6UXT9 468 aa23.35■■□□□ 1.33
CDR2-201ENST00000268383 TCRBV7S3A2A0A539 114 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 T-ENOLP0DO92 83 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 GM2AP17900 193 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 DNAJC24Q6P3W2 148 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 DEPTORQ8TB45 409 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 LRRC8CQ8TDW0 803 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 GPRASP2Q96D09 838 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 ZNF668Q96K58 619 aaPredicted RBP23.34■■□□□ 1.33
CDR2-201ENST00000268383 PLCD4Q9BRC7 762 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 NPHS2Q9NP85 383 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 DCTN4Q9UJW0 460 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 ZMYND8Q9ULU4 1186 aaPredicted RBP23.34■■□□□ 1.33
CDR2-201ENST00000268383 CLUHO75153 1309 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 CNTNAP2Q9UHC6 1331 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 hCG_1818297A0A087WSY0 165 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 ADRA1DP25100 572 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 HIRAP54198 1017 aaPredicted RBP23.34■■□□□ 1.33
CDR2-201ENST00000268383 ATP11AP98196 1134 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 CXCL9Q07325 125 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 ORC1Q13415 861 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 ACVR2BQ13705 512 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 OASLQ15646 514 aaKnown RBP23.34■■□□□ 1.33
CDR2-201ENST00000268383 MAPK6Q16659 721 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 CCHCR1Q8TD31 782 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 TEPSINQ96N21 525 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 MTMR12Q9C0I1 747 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 STARD13Q9Y3M8 1113 aa23.34■■□□□ 1.33
CDR2-201ENST00000268383 PLSCR1O15162 318 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 EPHB2P29323 1055 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 VCPP55072 806 aaKnown RBP23.33■■□□□ 1.33
CDR2-201ENST00000268383 SETDB1Q15047 1291 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 HHATQ5VTY9 493 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 TRIM72Q6ZMU5 477 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 OTOAQ7RTW8 1153 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 WDTC1Q8N5D0 677 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 TFAP2BQ92481 460 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 RBM41Q96IZ5 413 aaKnown RBP23.33■■□□□ 1.33
CDR2-201ENST00000268383 WDR83Q9BRX9 315 aaKnown RBP23.33■■□□□ 1.33
CDR2-201ENST00000268383 EDF1O60869 148 aaKnown RBP23.33■■□□□ 1.33
CDR2-201ENST00000268383 UPP2O95045 317 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 CD48P09326 243 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 CETN2P41208 172 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 MYL6P60660 151 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 MAP3K10Q02779 954 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 PLEKHG4Q58EX7 1191 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 GPAT2Q6NUI2 795 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 VCPIP1Q96JH7 1222 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 FAM167BQ9BTA0 163 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 DONSONQ9NYP3 566 aa23.33■■□□□ 1.33
CDR2-201ENST00000268383 H0Y3Z8 333 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 CDKN2BP42772 138 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 PDK4Q16654 411 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 FKBP1CQ5VVH2 108 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 MYOZ2Q9NPC6 264 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 USH1CQ9Y6N9 552 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 COL11A1P12107 1806 aaPredicted RBP23.32■■□□□ 1.32
CDR2-201ENST00000268383 TYROBPO43914 113 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 ATP2A2P16615 1042 aaKnown RBP23.32■■□□□ 1.32
CDR2-201ENST00000268383 ANKRD20A2Q5SQ80 823 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 ANKRD20A1Q5TYW2 823 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 ANKRD20A3Q5VUR7 823 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 GRAMD1AQ96CP6 724 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 CGRRF1Q99675 332 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 A0A1B0GUA9 196 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 ALOX15BO15296 676 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 PRPF4O43172 522 aaKnown RBP eCLIP23.32■■□□□ 1.32
CDR2-201ENST00000268383 CTCFP49711 727 aaPredicted RBP23.32■■□□□ 1.32
CDR2-201ENST00000268383 LMNB2Q03252 620 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 TFDP3Q5H9I0 405 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 BZW1Q7L1Q6 419 aaKnown RBP23.32■■□□□ 1.32
CDR2-201ENST00000268383 RHPN2Q8IUC4 686 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 RIBC1Q8N443 379 aaPredicted RBP23.32■■□□□ 1.32
CDR2-201ENST00000268383 RDM1Q8NG50 284 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 ACTL9Q8TC94 416 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 C10orf82Q8WW14 230 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 SLC7A6OSQ96CW6 309 aaPredicted RBP23.32■■□□□ 1.32
CDR2-201ENST00000268383 UBN1Q9NPG3 1134 aa23.32■■□□□ 1.32
CDR2-201ENST00000268383 RGPD3A6NKT7 1758 aaPredicted RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 RGPD4Q7Z3J3 1758 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 IL1R2P27930 398 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 YARSP54577 528 aaKnown RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 OTUD4Q01804 1114 aaKnown RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 TAF1BQ53T94 588 aaPredicted RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 CENPUQ71F23 418 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 EMC1Q8N766 993 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 NSUN6Q8TEA1 469 aaKnown RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 ZNF75CPQ92670 426 aaPredicted RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 TXLNGQ9NUQ3 528 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 MAP3K20Q9NYL2 800 aaKnown RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 SLC17A7Q9P2U7 560 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 PSME4Q14997 1843 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 A0A0B4J269 797 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 MAGEB2O15479 319 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 RFC1P35251 1148 aaPredicted RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 MORF4L2Q15014 288 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 HIF1AQ16665 826 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms