RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 FOXP3Q9BZS1 431 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 PSMC3IPQ9P2W1 217 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 GH1P01241 217 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 ENO1P06733 434 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 MYBL1P10243 752 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 CD58P19256 250 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 SLC1A1P43005 524 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 IGBP1P78318 339 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 LAMC2Q13753 1193 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 KRT80Q6KB66 452 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 KCTD6Q8NC69 237 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 C1orf131Q8NDD1 294 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 CCDC124Q96CT7 223 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 FAM118BQ9BPY3 351 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 OSBPL7Q9BZF2 842 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 WWP1Q9H0M0 922 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 POLR3FQ9H1D9 316 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 FOXN3O00409 490 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 AKAP3O75969 853 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 ITGB5P18084 799 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 LRRC36Q1X8D7 754 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 SPDYCQ5MJ68 293 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 NLRP9Q7RTR0 991 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 PPM1NQ8N819 430 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 DNAJC19Q96DA6 116 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 ZWILCHQ9H900 591 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 EPS15L1Q9UBC2 864 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 TRAF3IP3Q9Y228 551 aa12.12□□□□□ -0.47
CLSTN3-201ENST00000266546 MAGEA13PA6NCF6 341 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 DNM1LO00429 736 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 KRT38O76015 456 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 OATP04181 439 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 SHBGP04278 402 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 GSTA2P09210 222 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 RPL21P46778 160 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 Q3C1V9 767 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 SERPINI1Q99574 410 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 PDP2Q9P2J9 529 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 A0A0G2JLL6 359 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 B2RBV5 119 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 INO80B-WBP1J3KQ70 363 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ADAMTS3O15072 1205 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 TTC4O95801 387 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 RARRES1P49788 294 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 SNX16P57768 344 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 PRRT2Q7Z6L0 340 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 RHPN2Q8IUC4 686 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 PPWD1Q96BP3 646 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 MTBPQ96DY7 904 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 NSL1Q96IY1 281 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 INO80BQ9C086 356 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 PI4K2BG5E9Z4 385 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 DDX3XO00571 662 aaKnown RBP eCLIP12.11□□□□□ -0.475e-7■□□□□ 10.5
CLSTN3-201ENST00000266546 CFLARO15519 480 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 TMEM191BP0C7N4 346 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 SREBF2Q12772 1141 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 MXD4Q14582 209 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 LRRC55Q6ZSA7 311 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ANO5Q75V66 913 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 NUDCD3Q8IVD9 361 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ICA1LQ8NDH6 482 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 GLIS3Q8NEA6 775 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ATG4AQ8WYN0 398 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 OSBPL8Q9BZF1 889 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 CYP4F11Q9HBI6 524 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ZFYVE28Q9HCC9 887 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 G3BP2Q9UN86 482 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 IGSF9BQ9UPX0 1349 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 MAGEB2O15479 319 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 GARSP41250 739 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 HIC1Q14526 733 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ERICH1Q86X53 443 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ATP8B4Q8TF62 1192 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 ALKBH8Q96BT7 664 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 THTPAQ9BU02 230 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 WHRNQ9P202 907 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 FZD1Q9UP38 647 aa12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 DDX60LQ5H9U9 1706 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-201ENST00000266546 HBP1O60381 514 aa12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 NOP14P78316 857 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 OVGP1Q12889 678 aa12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 THOC5Q13769 683 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 MAPK6Q16659 721 aa12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 MDH1BQ5I0G3 518 aa12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 TMEM270Q6UE05 265 aa12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 C1orf186Q6ZWK4 172 aa12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 BZW1Q7L1Q6 419 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-201ENST00000266546 ZNF720Q7Z2F6 126 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms